Literature DB >> 31306518

Circular zymogens of human ribonuclease 1.

Ian W Windsor1,2, Crystal J Graff1, Ronald T Raines1,2,3.   

Abstract

The endogenous production of enzymes as zymogens provides a means to control catalytic activities. Here, we describe the heterologous production of ribonuclease 1 (RNase 1), which is the most prevalent secretory ribonuclease in humans, as a zymogen. In folded RNase 1, the N and C termini flank the enzymic active site. By using intein-mediated cis-splicing, we created circular proteins in which access to the active site of RNase 1 is obstructed by an amino-acid sequence that is recognized by the HIV-1 protease. Installing a sequence that does not perturb the RNase 1 fold led to only modest inactivation. In contrast, the ancillary truncation of residues from each terminus led to a substantial decrease in the catalytic activity of the zymogen with the maintenance of thermostability. For optimized zymogens, activation by HIV-1 protease led to a > 104 -fold increase in ribonucleolytic activity at a rate comparable to that for the cleavage of endogenous viral substrates. Molecular modeling indicated that these zymogens are inactivated by conformational distortion in addition to substrate occlusion. Because protease levels are elevated in many disease states and ribonucleolytic activity can be cytotoxic, RNase 1 zymogens have potential as generalizable prodrugs.
© 2019 The Protein Society.

Entities:  

Keywords:  HIV; circular protein; cytotoxin; intein; protease; ribonuclease; zymogen

Mesh:

Substances:

Year:  2019        PMID: 31306518      PMCID: PMC6699097          DOI: 10.1002/pro.3686

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  38 in total

1.  Identification of efficiently cleaved substrates for HIV-1 protease using a phage display library and use in inhibitor development.

Authors:  Z Q Beck; L Hervio; P E Dawson; J H Elder; E L Madison
Journal:  Virology       Date:  2000-09-01       Impact factor: 3.616

Review 2.  Thermal denaturation assays in chemical biology.

Authors:  Guillermo Senisterra; Irene Chau; Masoud Vedadi
Journal:  Assay Drug Dev Technol       Date:  2011-11-08       Impact factor: 1.738

3.  A ribonuclease zymogen activated by the NS3 protease of the hepatitis C virus.

Authors:  R J Johnson; Shawn R Lin; Ronald T Raines
Journal:  FEBS J       Date:  2006-12       Impact factor: 5.542

4.  A substrate selected by phage display exhibits enhanced side-chain hydrogen bonding to HIV-1 protease.

Authors:  Ian W Windsor; Ronald T Raines
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-06-27       Impact factor: 7.652

5.  Comparison of the HIV-1 and HIV-2 proteinases using oligopeptide substrates representing cleavage sites in Gag and Gag-Pol polyproteins.

Authors:  J Tözsér; I Bláha; T D Copeland; E M Wondrak; S Oroszlan
Journal:  FEBS Lett       Date:  1991-04-09       Impact factor: 4.124

6.  Human pancreatic ribonuclease--deletion of the carboxyl-terminal EDST extension enhances ribonuclease activity and thermostability.

Authors:  H P Bal; J K Batra
Journal:  Eur J Biochem       Date:  1997-04-15

7.  Hypersensitive substrate for ribonucleases.

Authors:  B R Kelemen; T A Klink; M A Behlke; S R Eubanks; P A Leland; R T Raines
Journal:  Nucleic Acids Res       Date:  1999-09-15       Impact factor: 16.971

8.  Crystal structure of ribonuclease A.d(ApTpApApG) complex. Direct evidence for extended substrate recognition.

Authors:  J C Fontecilla-Camps; R de Llorens; M H le Du; C M Cuchillo
Journal:  J Biol Chem       Date:  1994-08-26       Impact factor: 5.157

9.  Design and characterization of an HIV-specific ribonuclease zymogen.

Authors:  Rebecca F Turcotte; Ronald T Raines
Journal:  AIDS Res Hum Retroviruses       Date:  2008-11       Impact factor: 2.205

10.  Generalized fragment picking in Rosetta: design, protocols and applications.

Authors:  Dominik Gront; Daniel W Kulp; Robert M Vernon; Charlie E M Strauss; David Baker
Journal:  PLoS One       Date:  2011-08-24       Impact factor: 3.240

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  2 in total

1.  Circular zymogens of human ribonuclease 1.

Authors:  Ian W Windsor; Crystal J Graff; Ronald T Raines
Journal:  Protein Sci       Date:  2019-08-06       Impact factor: 6.725

Review 2.  Emerging biological functions of ribonuclease 1 and angiogenin.

Authors:  Emily R Garnett; Ronald T Raines
Journal:  Crit Rev Biochem Mol Biol       Date:  2021-12-09       Impact factor: 8.697

  2 in total

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