Literature DB >> 3130625

Sequence conservation and region shuffling in an endoglucanase and an exoglucanase from Cellulomonas fimi.

R A Warren1, C F Beck, N R Gilkes, D G Kilburn, M L Langsford, R C Miller, G P O'Neill, M Scheufens, W K Wong.   

Abstract

Cellulomonas fimi produces an endoglucanase and an exoglucanase which bind strongly to cellulose. Each enzyme contains three distinct regions: a short sequence of about 20 amino acids containing only proline and threonine (the Pro-Thr box); an irregular region, rich in hydroxyamino acids, of low charge density, and which is predicted to have little secondary structure; and an ordered region of higher charge density which contains a potential active site, and which is predicted to have secondary structure. The Pro-Thr box is conserved almost perfectly in the two enzymes. The irregular regions are 50% conserved, and the conserved sequences include four Asn-Xaa-Ser/Thr sites. The ordered regions appear not to be conserved, but the potential active sites both have the sequence Glu-Xaa7-Asn-Xaa6-Thr; they occur at widely separated sites in the two regions. The order of the regions is reversed in the two enzymes: irregular-Pro-Thr box-ordered in the endoglucanase; ordered-Pro-Thr box-irregular in the exoglucanase. The genes for the two enzymes appear to have arisen by shuffling of two conserved sequences and either one or two other sequences.

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Year:  1986        PMID: 3130625     DOI: 10.1002/prot.340010407

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  17 in total

1.  The tertiary structure of a bacterial cellulase determined by small-angle X-ray-scattering analysis.

Authors:  I Pilz; E Schwarz; D G Kilburn; R C Miller; R A Warren; N R Gilkes
Journal:  Biochem J       Date:  1990-10-01       Impact factor: 3.857

2.  Multiple domains in endoglucanase B (CenB) from Cellulomonas fimi: functions and relatedness to domains in other polypeptides.

Authors:  A Meinke; N R Gilkes; D G Kilburn; R C Miller; R A Warren
Journal:  J Bacteriol       Date:  1991-11       Impact factor: 3.490

3.  Expression in Escherichia coli of the Cellulomonas fimi Structural Gene for Endoglucanase B.

Authors:  J B Owolabi; P Beguin; D G Kilburn; R C Miller; R A Warren
Journal:  Appl Environ Microbiol       Date:  1988-02       Impact factor: 4.792

4.  Structure and transcription analysis of the gene encoding a cellobiase from Agrobacterium sp. strain ATCC 21400.

Authors:  W W Wakarchuk; N M Greenberg; D G Kilburn; R C Miller; R A Warren
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

5.  Spatial separation of protein domains is not necessary for catalytic activity or substrate binding in a xylanase.

Authors:  L M Ferreira; A J Durrant; J Hall; G P Hazlewood; H J Gilbert
Journal:  Biochem J       Date:  1990-07-01       Impact factor: 3.857

6.  Lambda foo: a lambda phage vector for the expression of foreign proteins.

Authors:  I N Maruyama; H I Maruyama; S Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-16       Impact factor: 11.205

7.  Structure of the cel-3 gene from Fibrobacter succinogenes S85 and characteristics of the encoded gene product, endoglucanase 3.

Authors:  M J McGavin; C W Forsberg; B Crosby; A W Bell; D Dignard; D Y Thomas
Journal:  J Bacteriol       Date:  1989-10       Impact factor: 3.490

8.  Identification and analysis of polyserine linker domains in prokaryotic proteins with emphasis on the marine bacterium Microbulbifer degradans.

Authors:  Michael B Howard; Nathan A Ekborg; Larry E Taylor; Steven W Hutcheson; Ronald M Weiner
Journal:  Protein Sci       Date:  2004-04-09       Impact factor: 6.725

9.  Nucleotide sequence and deletion analysis of the xylanase gene (xynZ) of Clostridium thermocellum.

Authors:  O Grépinet; M C Chebrou; P Béguin
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

10.  Unusual sequence organization in CenB, an inverting endoglucanase from Cellulomonas fimi.

Authors:  A Meinke; C Braun; N R Gilkes; D G Kilburn; R C Miller; R A Warren
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

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