Literature DB >> 31302725

Genome Analysis of Two Novel Lytic Vibrio maritimus Phages Isolated from the Coastal Surface Seawater of Qingdao, China.

Yuye Han1, Min Wang1,2,3, Qian Liu1, Yundan Liu1, Qi Wang1, Xueping Duan1, Lu Liu1, Yong Jiang1,2,3, Hongbing Shao1, Cui Guo4,5,6.   

Abstract

Two novel Vibrio phages, LP.1 and LP.2 that infected Vibrio maritimus R-40493, were isolated from surface seawater in Qingdao coastal area by the double-agar layer method. Morphological analysis by transmission electron microscope showed that the two phages displayed head-tail structures with icosahedral heads of 62.37 and 54.00 nm in diameter and long non-contractile tails of 119.00 and 105.20 nm in length, respectively, and can be grouped into the Siphoviridae family. Thermal and pH sensitivity tests exhibited that LP.1 was stable at temperature ranging from - 20 to 65 °C and at pH ranging from 5 to 12, and LP.2 showed vitality over a wider range of temperature (- 20-75 °C) and pH (3-12). Both LP.1 and LP.2 contained linear and double-stranded DNA genomes with a length of 46,791-bp and 37,128-bp, respectively. The genome of both phages can be classified into four functional groups, including DNA replication and regulation, phage packaging, phage structure, and additional function. The bioinformatic analysis demonstrated that the Vibrio phages LP.1 and LP.2 are novel phages. By conducting morphological, biochemical, and genomic analysis, our study provides useful information for further research on the interaction between Vibrio phages and their host.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31302725     DOI: 10.1007/s00284-019-01736-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  26 in total

Review 1.  Marine viruses and their biogeochemical and ecological effects.

Authors:  J A Fuhrman
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

2.  Isolation and Complete Genome Sequence of a Novel Pseudoalteromonas Phage PH357 from the Yangtze River Estuary.

Authors:  Zheng Gong; Min Wang; Qingwei Yang; Zhongshi Li; Jun Xia; Yu Gao; Yong Jiang; Xue Meng; Zhaoyang Liu; Ding Yang; Fangfei Zhang; Hongbing Shao; Duobing Wang
Journal:  Curr Microbiol       Date:  2017-04-20       Impact factor: 2.188

Review 3.  Marine viruses and global climate change.

Authors:  Roberto Danovaro; Cinzia Corinaldesi; Antonio Dell'anno; Jed A Fuhrman; Jack J Middelburg; Rachel T Noble; Curtis A Suttle
Journal:  FEMS Microbiol Rev       Date:  2011-01-04       Impact factor: 16.408

4.  Genome sequences of siphoviruses infecting marine Synechococcus unveil a diverse cyanophage group and extensive phage-host genetic exchanges.

Authors:  Sijun Huang; Kui Wang; Nianzhi Jiao; Feng Chen
Journal:  Environ Microbiol       Date:  2011-12-22       Impact factor: 5.491

5.  Vibrio variabilis sp. nov. and Vibrio maritimus sp. nov., isolated from Palythoa caribaeorum.

Authors:  Luciane A Chimetto; Ilse Cleenwerck; Ana Paula B Moreira; Marcelo Brocchi; Anne Willems; Paul De Vos; Fabiano L Thompson
Journal:  Int J Syst Evol Microbiol       Date:  2011-02-04       Impact factor: 2.747

6.  Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses.

Authors:  A-C Baudoux; R W Hendrix; G C Lander; X Bailly; S Podell; C Paillard; J E Johnson; C S Potter; B Carragher; F Azam
Journal:  Environ Microbiol       Date:  2012-01-09       Impact factor: 5.491

7.  Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability.

Authors:  Stephen T Abedon; Paul Hyman; Cameron Thomas
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

Review 8.  What genomic sequence information has revealed about Vibrio ecology in the ocean--a review.

Authors:  Darrell Jay Grimes; Crystal N Johnson; Kevin S Dillon; Adrienne R Flowers; Nicholas F Noriea; Tracy Berutti
Journal:  Microb Ecol       Date:  2009-10       Impact factor: 4.552

9.  The Polyphyletic Origins of Primase-Helicase Bifunctional Proteins.

Authors:  Ankita Gupta; Supriya Patil; Ramya Vijayakumar; Kiran Kondabagil
Journal:  J Mol Evol       Date:  2017-11-15       Impact factor: 3.973

10.  Locating and Activating Molecular 'Time Bombs': Induction of Mycolata Prophages.

Authors:  Zoe A Dyson; Teagan L Brown; Ben Farrar; Stephen R Doyle; Joseph Tucci; Robert J Seviour; Steve Petrovski
Journal:  PLoS One       Date:  2016-08-03       Impact factor: 3.240

View more
  1 in total

1.  Comparative genomic analysis of dwarf Vibrio myoviruses defines a conserved gene cluster for successful phage infection.

Authors:  Dimitrios Skliros; Efthymios Karpouzis; Chrysanthi Kalloniati; Pantelis Katharios; Emmanouil Flemetakis
Journal:  Arch Virol       Date:  2022-01-08       Impact factor: 2.574

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.