| Literature DB >> 31283075 |
Bradley T Falk1, Yingkai Liang2, Marc Bailly3, Fahimeh Raoufi3, Ahmet Kekec4, Dmitri Pissarnitski4, Dennis Feng4, Lin Yan4, Songnian Lin4, Laurence Fayadat-Dilman3, Mark A McCoy1.
Abstract
NMR measurements of rotational and translational diffusion are used to characterize the solution behavior of a wide variety of therapeutic proteins and peptides. The timescales of motions sampled in these experiments reveal complicated intrinsic solution behavior such as flexibility, that is central to function, as well as self-interactions, stress-induced conformational changes and other critical attributes that can be discovery and development liabilities. Trends from proton transverse relaxation (R2 ) and hydrodynamic radius (Rh ) are correlated and used to identify and differentiate intermolecular from intramolecular interactions. In this study, peptide behavior is consistent with complicated multimer self-assembly, while multi-domain protein behavior is dominated by intramolecular interactions. These observations are supplemented by simulations that include effects from slow transient interactions and rapid internal motions. R2 -Rh correlations provide a means to profile protein motions as well as interactions. The approach is completely general and can be applied to therapeutic and target protein characterization.Keywords: NMR spectroscopy; relaxation; therapeutic proteins; translational self-diffusion
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Year: 2019 PMID: 31283075 DOI: 10.1002/cbic.201900296
Source DB: PubMed Journal: Chembiochem ISSN: 1439-4227 Impact factor: 3.164