Literature DB >> 31259005

A multi-task deep learning model for the classification of Age-related Macular Degeneration.

Qingyu Chen1, Yifan Peng1, Tiarnan Keenan2, Shazia Dharssi2, Elvira Agro N2, Wai T Wong2, Emily Y Chew2, Zhiyong Lu1.   

Abstract

Age-related Macular Degeneration (AMD) is a leading cause of blindness. Although the Age-Related Eye Disease Study group previously developed a 9-step AMD severity scale for manual classification of AMD severity from color fundus images, manual grading of images is time-consuming and expensive. Built on our previous work DeepSeeNet, we developed a novel deep learning model for automated classification of images into the 9-step scale. Instead of predicting the 9-step score directly, our approach simulates the reading center grading process. It first detects four AMD characteristics (drusen area, geographic atrophy, increased pigment, and depigmentation), then combines these to derive the overall 9-step score. Importantly, we applied multi-task learning techniques, which allowed us to train classification of the four characteristics in parallel, share representation, and prevent overfitting. Evaluation on two image datasets showed that the accuracy of the model exceeded the current state-of-the-art model by > 10%. Availability: https://github.com/ncbi-nlp/DeepSeeNet.

Entities:  

Year:  2019        PMID: 31259005      PMCID: PMC6568069     

Source DB:  PubMed          Journal:  AMIA Jt Summits Transl Sci Proc


  7 in total

1.  A Deep Learning Approach for Automated Detection of Geographic Atrophy from Color Fundus Photographs.

Authors:  Tiarnan D Keenan; Shazia Dharssi; Yifan Peng; Qingyu Chen; Elvira Agrón; Wai T Wong; Zhiyong Lu; Emily Y Chew
Journal:  Ophthalmology       Date:  2019-06-11       Impact factor: 12.079

2.  Multi-task deep learning-based survival analysis on the prognosis of late AMD using the longitudinal data in AREDS.

Authors:  Gregory Ghahramani; Matthew Brendel; Mingquan Lin; Qingyu Chen; Tiarnan Keenan; Kun Chen; Emily Chew; Zhiyong Lu; Yifan Peng; Fei Wang
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

3.  Application of Deep Learning for Automated Detection of Polypoidal Choroidal Vasculopathy in Spectral Domain Optical Coherence Tomography.

Authors:  Papis Wongchaisuwat; Ranida Thamphithak; Peerakarn Jitpukdee; Nida Wongchaisuwat
Journal:  Transl Vis Sci Technol       Date:  2022-10-03       Impact factor: 3.048

4.  Predicting Age-Related Macular Degeneration Progression with Contrastive Attention and Time-Aware LSTM.

Authors:  Changchang Yin; Sayoko E Moroi; Ping Zhang
Journal:  KDD       Date:  2022-08-14

5.  Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical records.

Authors:  Qingyu Chen; Jingcheng Du; Sun Kim; W John Wilbur; Zhiyong Lu
Journal:  BMC Med Inform Decis Mak       Date:  2020-04-30       Impact factor: 2.796

6.  Predicting risk of late age-related macular degeneration using deep learning.

Authors:  Yifan Peng; Tiarnan D Keenan; Qingyu Chen; Elvira Agrón; Alexis Allot; Wai T Wong; Emily Y Chew; Zhiyong Lu
Journal:  NPJ Digit Med       Date:  2020-08-27

7.  Improving Interpretability in Machine Diagnosis: Detection of Geographic Atrophy in OCT Scans.

Authors:  Xiaoshuang Shi; Tiarnan D L Keenan; Qingyu Chen; Tharindu De Silva; Alisa T Thavikulwat; Geoffrey Broadhead; Sanjeeb Bhandari; Catherine Cukras; Emily Y Chew; Zhiyong Lu
Journal:  Ophthalmol Sci       Date:  2021-07-13
  7 in total

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