Literature DB >> 35308963

Multi-task deep learning-based survival analysis on the prognosis of late AMD using the longitudinal data in AREDS.

Gregory Ghahramani1, Matthew Brendel1, Mingquan Lin2, Qingyu Chen3, Tiarnan Keenan4, Kun Chen5, Emily Chew4, Zhiyong Lu3, Yifan Peng2, Fei Wang2.   

Abstract

Age-related macular degeneration (AMD) is the leading cause of vision loss. Some patients experience vision loss over a delayed timeframe, others at a rapid pace. Physicians analyze time-of-visit fundus photographs to predict patient risk of developing late-AMD, the most severe form of AMD. Our study hypothesizes that 1) incorporating historical data improves predictive strength of developing late-AMD and 2) state-of-the-art deep-learning techniques extract more predictive image features than clinicians do. We incorporate longitudinal data from the Age-Related Eye Disease Studies and deep-learning extracted image features in survival settings to predict development of late- AMD. To extract image features, we used multi-task learning frameworks to train convolutional neural networks. Our findings show 1) incorporating longitudinal data improves prediction of late-AMD for clinical standard features, but only the current visit is informative when using complex features and 2) "deep-features" are more informative than clinician derived features. We make codes publicly available at https://github.com/bionlplab/AMD_prognosis_amia2021. ©2021 AMIA - All rights reserved.

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Year:  2022        PMID: 35308963      PMCID: PMC8861665     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  16 in total

1.  The Age-Related Eye Disease Study (AREDS): design implications. AREDS report no. 1.

Authors: 
Journal:  Control Clin Trials       Date:  1999-12

2.  A Deep Learning Approach for Automated Detection of Geographic Atrophy from Color Fundus Photographs.

Authors:  Tiarnan D Keenan; Shazia Dharssi; Yifan Peng; Qingyu Chen; Elvira Agrón; Wai T Wong; Zhiyong Lu; Emily Y Chew
Journal:  Ophthalmology       Date:  2019-06-11       Impact factor: 12.079

3.  A simplified severity scale for age-related macular degeneration: AREDS Report No. 18.

Authors:  Frederick L Ferris; Matthew D Davis; Traci E Clemons; Li-Yin Lee; Emily Y Chew; Anne S Lindblad; Roy C Milton; Susan B Bressler; Ronald Klein
Journal:  Arch Ophthalmol       Date:  2005-11

4.  The Age-Related Eye Disease Study system for classifying age-related macular degeneration from stereoscopic color fundus photographs: the Age-Related Eye Disease Study Report Number 6.

Authors: 
Journal:  Am J Ophthalmol       Date:  2001-11       Impact factor: 5.258

5.  Causes and prevalence of visual impairment among adults in the United States.

Authors:  Nathan Congdon; Benita O'Colmain; Caroline C W Klaver; Ronald Klein; Beatriz Muñoz; David S Friedman; John Kempen; Hugh R Taylor; Paul Mitchell
Journal:  Arch Ophthalmol       Date:  2004-04

6.  Leading causes of certifiable visual loss in England and Wales during the year ending 31 March 2013.

Authors:  A Quartilho; P Simkiss; A Zekite; W Xing; R Wormald; C Bunce
Journal:  Eye (Lond)       Date:  2016-01-29       Impact factor: 3.775

7.  Clinical-grade computational pathology using weakly supervised deep learning on whole slide images.

Authors:  Gabriele Campanella; Matthew G Hanna; Luke Geneslaw; Allen Miraflor; Vitor Werneck Krauss Silva; Klaus J Busam; Edi Brogi; Victor E Reuter; David S Klimstra; Thomas J Fuchs
Journal:  Nat Med       Date:  2019-07-15       Impact factor: 53.440

8.  Predicting risk of late age-related macular degeneration using deep learning.

Authors:  Yifan Peng; Tiarnan D Keenan; Qingyu Chen; Elvira Agrón; Alexis Allot; Wai T Wong; Emily Y Chew; Zhiyong Lu
Journal:  NPJ Digit Med       Date:  2020-08-27

9.  Regional differences in the global burden of age-related macular degeneration.

Authors:  Xiayan Xu; Jing Wu; Xiaoning Yu; Yelei Tang; Xiajing Tang; Xingchao Shentu
Journal:  BMC Public Health       Date:  2020-03-30       Impact factor: 3.295

10.  Novel coronavirus (COVID-19) diagnosis using computer vision and artificial intelligence techniques: a review.

Authors:  Anuja Bhargava; Atul Bansal
Journal:  Multimed Tools Appl       Date:  2021-03-03       Impact factor: 2.757

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  1 in total

1.  Automated diagnosing primary open-angle glaucoma from fundus image by simulating human's grading with deep learning.

Authors:  Mingquan Lin; Bojian Hou; Lei Liu; Mae Gordon; Michael Kass; Fei Wang; Sarah H Van Tassel; Yifan Peng
Journal:  Sci Rep       Date:  2022-08-18       Impact factor: 4.996

  1 in total

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