Literature DB >> 31246415

Fast Fluorescence Lifetime Imaging Reveals the Aggregation Processes of α-Synuclein and Polyglutamine in Aging Caenorhabditis elegans.

Romain F Laine1, Tessa Sinnige2, Kai Yu Ma2, Amanda J Haack1,3, Chetan Poudel1, Peter Gaida1, Nathan Curry1, Michele Perni2, Ellen A A Nollen4, Christopher M Dobson2, Michele Vendruscolo2, Gabriele S Kaminski Schierle3, Clemens F Kaminski1.   

Abstract

The nematode worm Caenorhabditis elegans has emerged as an important model organism in the study of the molecular mechanisms of protein misfolding diseases associated with amyloid formation because of its small size, ease of genetic manipulation, and optical transparency. Obtaining a reliable and quantitative read-out of protein aggregation in this system, however, remains a challenge. To address this problem, we here present a fast time-gated fluorescence lifetime imaging (TG-FLIM) method and show that it provides functional insights into the process of protein aggregation in living animals by enabling the rapid characterization of different types of aggregates. Specifically, in longitudinal studies of C. elegans models of Parkinson's and Huntington's diseases, we observed marked differences in the aggregation kinetics and the nature of the protein inclusions formed by α-synuclein and polyglutamine. In particular, we found that α-synuclein inclusions do not display amyloid-like features until late in the life of the worms, whereas polyglutamine forms amyloid characteristics rapidly in early adulthood. Furthermore, we show that the TG-FLIM method is capable of imaging live and non-anaesthetized worms moving in specially designed agarose microchambers. Taken together, our results show that the TG-FLIM method enables high-throughput functional imaging of living C. elegans that can be used to study in vivo mechanisms of protein aggregation and that has the potential to aid the search for therapeutic modifiers of protein aggregation and toxicity.

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Year:  2019        PMID: 31246415      PMCID: PMC7612977          DOI: 10.1021/acschembio.9b00354

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   4.634


  45 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Dynamic imaging by fluorescence correlation spectroscopy identifies diverse populations of polyglutamine oligomers formed in vivo.

Authors:  Monica Beam; M Catarina Silva; Richard I Morimoto
Journal:  J Biol Chem       Date:  2012-06-05       Impact factor: 5.157

3.  Agarose hydrogel microcompartments for imaging sleep- and wake-like behavior and nervous system development in Caenorhabditis elegans larvae.

Authors:  Henrik Bringmann
Journal:  J Neurosci Methods       Date:  2011-07-23       Impact factor: 2.390

4.  Amyloid-like features of polyglutamine aggregates and their assembly kinetics.

Authors:  Songming Chen; Valerie Berthelier; J Bradley Hamilton; Brian O'Nuallain; Ronald Wetzel
Journal:  Biochemistry       Date:  2002-06-11       Impact factor: 3.162

5.  Neurodegeneration and defective neurotransmission in a Caenorhabditis elegans model of tauopathy.

Authors:  Brian C Kraemer; Bin Zhang; James B Leverenz; James H Thomas; John Q Trojanowski; Gerard D Schellenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-18       Impact factor: 11.205

6.  Structural characterization of toxic oligomers that are kinetically trapped during α-synuclein fibril formation.

Authors:  Serene W Chen; Srdja Drakulic; Emma Deas; Myriam Ouberai; Francesco A Aprile; Rocío Arranz; Samuel Ness; Cintia Roodveldt; Tim Guilliams; Erwin J De-Genst; David Klenerman; Nicholas W Wood; Tuomas P J Knowles; Carlos Alfonso; Germán Rivas; Andrey Y Abramov; José María Valpuesta; Christopher M Dobson; Nunilo Cremades
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-08       Impact factor: 11.205

7.  Direct observation of the interconversion of normal and toxic forms of α-synuclein.

Authors:  Nunilo Cremades; Samuel I A Cohen; Emma Deas; Andrey Y Abramov; Allen Y Chen; Angel Orte; Massimo Sandal; Richard W Clarke; Paul Dunne; Francesco A Aprile; Carlos W Bertoncini; Nicholas W Wood; Tuomas P J Knowles; Christopher M Dobson; David Klenerman
Journal:  Cell       Date:  2012-05-25       Impact factor: 41.582

8.  Retarded PDI diffusion and a reductive shift in poise of the calcium depleted endoplasmic reticulum.

Authors:  Edward Avezov; Tasuku Konno; Alisa Zyryanova; Weiyue Chen; Romain Laine; Ana Crespillo-Casado; Eduardo Pinho Melo; Ryo Ushioda; Kazuhiro Nagata; Clemens F Kaminski; Heather P Harding; David Ron
Journal:  BMC Biol       Date:  2015-01-10       Impact factor: 7.431

9.  Automated fluorescence lifetime imaging plate reader and its application to Förster resonant energy transfer readout of Gag protein aggregation.

Authors:  Dominic Alibhai; Douglas J Kelly; Sean Warren; Sunil Kumar; Anca Margineau; Remigiusz A Serwa; Emmanuelle Thinon; Yuriy Alexandrov; Edward J Murray; Frank Stuhmeier; Edward W Tate; Mark A A Neil; Chris Dunsby; Paul M W French
Journal:  J Biophotonics       Date:  2012-11-26       Impact factor: 3.207

10.  A method to quantify FRET stoichiometry with phasor plot analysis and acceptor lifetime ingrowth.

Authors:  WeiYue Chen; Edward Avezov; Simon C Schlachter; Fabrice Gielen; Romain F Laine; Heather P Harding; Florian Hollfelder; David Ron; Clemens F Kaminski
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

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  13 in total

Review 1.  Molecular mechanisms of amyloid formation in living systems.

Authors:  Tessa Sinnige
Journal:  Chem Sci       Date:  2022-05-17       Impact factor: 9.969

2.  A FRET-based method for monitoring structural transitions in protein self-organization.

Authors:  Qi Wan; Sara N Mouton; Liesbeth M Veenhoff; Arnold J Boersma
Journal:  Cell Rep Methods       Date:  2022-03-28

3.  Using a Caenorhabditis elegans Parkinson's Disease Model to Assess Disease Progression and Therapy Efficiency.

Authors:  Samantha Hughes; Maritza van Dop; Nikki Kolsters; David van de Klashorst; Anastasia Pogosova; Anouk M Rijs
Journal:  Pharmaceuticals (Basel)       Date:  2022-04-22

Review 4.  Probing and engineering liquid-phase organelles.

Authors:  Dan Bracha; Mackenzie T Walls; Clifford P Brangwynne
Journal:  Nat Biotechnol       Date:  2019-12-02       Impact factor: 54.908

5.  Automated phenotyping and lifespan assessment of a C. elegans model of Parkinson's disease.

Authors:  Minwook Kim; Daniela Knoefler; Ellen Quarles; Ursula Jakob; Daphne Bazopoulou
Journal:  Transl Med Aging       Date:  2020-04-19

6.  Kinetic analysis reveals that independent nucleation events determine the progression of polyglutamine aggregation in C. elegans.

Authors:  Tessa Sinnige; Georg Meisl; Thomas C T Michaels; Michele Vendruscolo; Tuomas P J Knowles; Richard I Morimoto
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

7.  Comparative Studies in the A30P and A53T α-Synuclein C. elegans Strains to Investigate the Molecular Origins of Parkinson's Disease.

Authors:  Michele Perni; Annemieke van der Goot; Ryan Limbocker; Tjakko J van Ham; Francesco A Aprile; Catherine K Xu; Patrick Flagmeier; Karen Thijssen; Pietro Sormanni; Giuliana Fusco; Serene W Chen; Pavan K Challa; Julius B Kirkegaard; Romain F Laine; Kai Yu Ma; Martin B D Müller; Tessa Sinnige; Janet R Kumita; Samuel I A Cohen; Renée Seinstra; Gabriele S Kaminski Schierle; Clemens F Kaminski; Denise Barbut; Alfonso De Simone; Tuomas P J Knowles; Michael Zasloff; Ellen A A Nollen; Michele Vendruscolo; Christopher M Dobson
Journal:  Front Cell Dev Biol       Date:  2021-03-22

8.  Dynamic Mode Decomposition of Fluorescence Loss in Photobleaching Microscopy Data for Model-Free Analysis of Protein Transport and Aggregation in Living Cells.

Authors:  Daniel Wüstner
Journal:  Sensors (Basel)       Date:  2022-06-23       Impact factor: 3.847

9.  Observation of an α-synuclein liquid droplet state and its maturation into Lewy body-like assemblies.

Authors:  Maarten C Hardenberg; Tessa Sinnige; Sam Casford; Samuel T Dada; Chetan Poudel; Elizabeth A Robinson; Monika Fuxreiter; Clemens F Kaminksi; Gabriele S Kaminski Schierle; Ellen A A Nollen; Christopher M Dobson; Michele Vendruscolo
Journal:  J Mol Cell Biol       Date:  2021-08-04       Impact factor: 6.216

Review 10.  High-throughput, multi-parametric, and correlative fluorescence lifetime imaging.

Authors:  Chetan Poudel; Ioanna Mela; Clemens F Kaminski
Journal:  Methods Appl Fluoresc       Date:  2020-02-20       Impact factor: 3.009

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