Literature DB >> 31227642

Transcription factor autoregulation is required for acquisition and maintenance of neuronal identity.

Eduardo Leyva-Díaz1, Oliver Hobert2.   

Abstract

The expression of transcription factors that initiate the specification of a unique cellular identity in multicellular organisms is often maintained throughout the life of the respective cell type via an autoregulatory mechanism. It is generally assumed that such autoregulation serves to maintain the differentiated state of a cell. To experimentally test this assumption, we used CRISPR/Cas9-mediated genome engineering to delete a transcriptional autoregulatory, cis-acting motif in the che-1 zinc-finger transcription factor locus, a terminal selector required to specify the identity of the ASE neuron pair during embryonic development of the nematode Caenorhabditis elegans. We show that che-1 autoregulation is indeed required to maintain the differentiated state of the ASE neurons but that it is also required to amplify che-1 expression during embryonic development to reach an apparent minimal threshold to initiate the ASE differentiation program. We conclude that transcriptional autoregulation fulfills two intrinsically linked purposes: one in proper initiation, the other in proper maintenance of terminal differentiation programs.This article has an associated 'The people behind the papers' interview.
© 2019. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Autoregulation; C. elegans; Neuronal identity; Transcriptional control

Mesh:

Substances:

Year:  2019        PMID: 31227642      PMCID: PMC6633604          DOI: 10.1242/dev.177378

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  43 in total

1.  The C. elegans che-1 gene encodes a zinc finger transcription factor required for specification of the ASE chemosensory neurons.

Authors:  Okiko Uchida; Hiroyuki Nakano; Makoto Koga; Yasumi Ohshima
Journal:  Development       Date:  2003-04       Impact factor: 6.868

2.  Regulatory gene networks and the properties of the developmental process.

Authors:  Eric H Davidson; David R McClay; Leroy Hood
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-10       Impact factor: 11.205

Review 3.  Transcription regulation and animal diversity.

Authors:  Michael Levine; Robert Tjian
Journal:  Nature       Date:  2003-07-10       Impact factor: 49.962

4.  Chemosensory neurons with overlapping functions direct chemotaxis to multiple chemicals in C. elegans.

Authors:  C I Bargmann; H R Horvitz
Journal:  Neuron       Date:  1991-11       Impact factor: 17.173

5.  Direct homeodomain-DNA interaction in the autoregulation of the fushi tarazu gene.

Authors:  A F Schier; W J Gehring
Journal:  Nature       Date:  1992-04-30       Impact factor: 49.962

6.  Expression and regulation of an FMRFamide-related neuropeptide gene family in Caenorhabditis elegans.

Authors:  Kyuhyung Kim; Chris Li
Journal:  J Comp Neurol       Date:  2004-08-02       Impact factor: 3.215

7.  Functional asymmetry in Caenorhabditis elegans taste neurons and its computational role in chemotaxis.

Authors:  Hiroshi Suzuki; Tod R Thiele; Serge Faumont; Marina Ezcurra; Shawn R Lockery; William R Schafer
Journal:  Nature       Date:  2008-07-03       Impact factor: 49.962

8.  Cis-regulatory mechanisms of left/right asymmetric neuron-subtype specification in C. elegans.

Authors:  John F Etchberger; Eileen B Flowers; Richard J Poole; Enkelejda Bashllari; Oliver Hobert
Journal:  Development       Date:  2009-01       Impact factor: 6.868

9.  A transcriptional regulatory cascade that controls left/right asymmetry in chemosensory neurons of C. elegans.

Authors:  Sarah Chang; Robert J Johnston; Oliver Hobert
Journal:  Genes Dev       Date:  2003-09-01       Impact factor: 11.361

10.  The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.

Authors:  John F Etchberger; Adam Lorch; Monica C Sleumer; Richard Zapf; Steven J Jones; Marco A Marra; Robert A Holt; Donald G Moerman; Oliver Hobert
Journal:  Genes Dev       Date:  2007-07-01       Impact factor: 11.361

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  14 in total

1.  Mechanism of life-long maintenance of neuron identity despite molecular fluctuations.

Authors:  Joleen Jh Traets; Servaas N van der Burght; Suzanne Rademakers; Gert Jansen; Jeroen S van Zon
Journal:  Elife       Date:  2021-12-15       Impact factor: 8.140

2.  Reorganization of postmitotic neuronal chromatin accessibility for maturation of serotonergic identity.

Authors:  Xinrui L Zhang; William C Spencer; Nobuko Tabuchi; Meagan M Kitt; Evan S Deneris
Journal:  Elife       Date:  2022-04-26       Impact factor: 8.713

3.  Cooperation between HDAC3 and DAX1 mediates lineage restriction of embryonic stem cells.

Authors:  Daniel Olivieri; Eleonora Castelli; Yumiko K Kawamura; Panagiotis Papasaikas; Ilya Lukonin; Melanie Rittirsch; Daniel Hess; Sébastien A Smallwood; Michael B Stadler; Antoine H F M Peters; Joerg Betschinger
Journal:  EMBO J       Date:  2021-04-28       Impact factor: 14.012

4.  Positive autofeedback regulation of Ptf1a transcription generates the levels of PTF1A required to generate itch circuit neurons.

Authors:  Bishakha Mona; Juan Villarreal; Trisha K Savage; Rahul K Kollipara; Brooke E Boisvert; Jane E Johnson
Journal:  Genes Dev       Date:  2020-04-02       Impact factor: 11.361

5.  Unlike Drosophila elav, the C. elegans elav orthologue exc-7 is not panneuronally expressed.

Authors:  Kenneth Pham; Oliver Hobert
Journal:  MicroPubl Biol       Date:  2019-10-30

6.  A new method of recording from the giant fiber of Drosophila melanogaster shows that the strength of its auditory inputs remains constant with age.

Authors:  Jonathan M Blagburn
Journal:  PLoS One       Date:  2020-01-07       Impact factor: 3.240

7.  The Prop1-like homeobox gene unc-42 specifies the identity of synaptically connected neurons.

Authors:  Emily G Berghoff; Lori Glenwinkel; Abhishek Bhattacharya; HaoSheng Sun; Erdem Varol; Nicki Mohammadi; Amelia Antone; Yi Feng; Ken Nguyen; Steven J Cook; Jordan F Wood; Neda Masoudi; Cyril C Cros; Yasmin H Ramadan; Denise M Ferkey; David H Hall; Oliver Hobert
Journal:  Elife       Date:  2021-06-24       Impact factor: 8.140

8.  Responsiveness to perturbations is a hallmark of transcription factors that maintain cell identity in vitro.

Authors:  Ian A Mellis; Hailey I Edelstein; Rachel Truitt; Yogesh Goyal; Lauren E Beck; Orsolya Symmons; Margaret C Dunagin; Ricardo A Linares Saldana; Parisha P Shah; Juan A Pérez-Bermejo; Arun Padmanabhan; Wenli Yang; Rajan Jain; Arjun Raj
Journal:  Cell Syst       Date:  2021-08-04       Impact factor: 11.091

9.  Establishment and maintenance of motor neuron identity via temporal modularity in terminal selector function.

Authors:  Yinan Li; Anthony Osuma; Edgar Correa; Munachiso A Okebalama; Pauline Dao; Olivia Gaylord; Jihad Aburas; Priota Islam; André Ex Brown; Paschalis Kratsios
Journal:  Elife       Date:  2020-10-01       Impact factor: 8.140

10.  Unique homeobox codes delineate all the neuron classes of C. elegans.

Authors:  Molly B Reilly; Cyril Cros; Erdem Varol; Eviatar Yemini; Oliver Hobert
Journal:  Nature       Date:  2020-08-19       Impact factor: 49.962

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