Literature DB >> 31217334

Epigenetic activation and memory at a TGFB2 enhancer in systemic sclerosis.

Joseph Yusup Shin1, James Daniel Beckett2, Rustam Bagirzadeh2, Tyler J Creamer2, Ami A Shah3, Zsuzsanna McMahan3, Julie J Paik3, Margaret M Sampedro3, Elena G MacFarlane2, Michael A Beer2,4, Daniel Warren5, Fredrick M Wigley3, Harry C Dietz1,6.   

Abstract

In systemic sclerosis (SSc), previously healthy adults develop an inflammatory prodrome with subsequent progressive fibrosis of the skin and viscera. SSc has a weak signature for genetic contribution, and there are few pathogenic insights or targeted treatments for this condition. Here, chromatin accessibility and transcriptome profiling coupled with targeted epigenetic editing revealed constitutive activation of a previously unannotated transforming growth factor-β2 (TGFB2) enhancer maintained through epigenetic memory in SSc. The resulting autocrine TGFβ2 signaling enforced a profibrotic synthetic state in ex vivo fibroblasts from patients with SSc. Inhibition of NF-κB or BRD4 achieved sustained inhibition of TGFB2 enhancer activity, mitigated profibrotic gene expression, and reversed dermal fibrosis in patient skin explants. These findings suggest a potential epigenetic mechanism of fibrosis in SSc and inform a regulatory mechanism of TGFB2, a major profibrotic cytokine.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Year:  2019        PMID: 31217334      PMCID: PMC6995475          DOI: 10.1126/scitranslmed.aaw0790

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  41 in total

1.  Brd4 coactivates transcriptional activation of NF-kappaB via specific binding to acetylated RelA.

Authors:  Bo Huang; Xiao-Dong Yang; Ming-Ming Zhou; Keiko Ozato; Lin-Feng Chen
Journal:  Mol Cell Biol       Date:  2008-12-22       Impact factor: 4.272

2.  Brd4 marks select genes on mitotic chromatin and directs postmitotic transcription.

Authors:  Anup Dey; Akira Nishiyama; Tatiana Karpova; James McNally; Keiko Ozato
Journal:  Mol Biol Cell       Date:  2009-10-07       Impact factor: 4.138

3.  Postnatal induction of transforming growth factor beta signaling in fibroblasts of mice recapitulates clinical, histologic, and biochemical features of scleroderma.

Authors:  Sonali Sonnylal; Christopher P Denton; Bing Zheng; Douglas R Keene; Ruming He; Henry P Adams; Carolyn S Vanpelt; Yong J Geng; Jenny M Deng; Richard R Behringer; Benoit de Crombrugghe
Journal:  Arthritis Rheum       Date:  2007-01

4.  Transforming growth factor-beta 2 levels in aqueous humor of glaucomatous eyes.

Authors:  M Inatani; H Tanihara; H Katsuta; M Honjo; N Kido; Y Honda
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2001-02       Impact factor: 3.117

Review 5.  A meta-analysis of mortality in rheumatic diseases.

Authors:  Esther Toledano; Gloria Candelas; Zulema Rosales; Cristina Martínez Prada; Leticia León; Lydia Abásolo; Estíbaliz Loza; Loreto Carmona; Aurelio Tobías; Juan Ángel Jover
Journal:  Reumatol Clin       Date:  2012-07-11

6.  Akt blockade downregulates collagen and upregulates MMP1 in human dermal fibroblasts.

Authors:  Andreea M Bujor; Jaspreet Pannu; Shizhong Bu; Edwin A Smith; Robin C Muise-Helmericks; Maria Trojanowska
Journal:  J Invest Dermatol       Date:  2008-03-06       Impact factor: 8.551

7.  Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers.

Authors:  Isaac B Hilton; Anthony M D'Ippolito; Christopher M Vockley; Pratiksha I Thakore; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Biotechnol       Date:  2015-04-06       Impact factor: 54.908

8.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

9.  Risk loci for chronic obstructive pulmonary disease: a genome-wide association study and meta-analysis.

Authors:  Michael H Cho; Merry-Lynn N McDonald; Xiaobo Zhou; Manuel Mattheisen; Peter J Castaldi; Craig P Hersh; Dawn L Demeo; Jody S Sylvia; John Ziniti; Nan M Laird; Christoph Lange; Augusto A Litonjua; David Sparrow; Richard Casaburi; R Graham Barr; Elizabeth A Regan; Barry J Make; John E Hokanson; Sharon Lutz; Tanda Murray Dudenkov; Homayoon Farzadegan; Jacqueline B Hetmanski; Ruth Tal-Singer; David A Lomas; Per Bakke; Amund Gulsvik; James D Crapo; Edwin K Silverman; Terri H Beaty
Journal:  Lancet Respir Med       Date:  2014-02-07       Impact factor: 30.700

10.  Guidance of super-enhancers in regulation of IL-9 induction and airway inflammation.

Authors:  Xiang Xiao; Yihui Fan; Junhui Li; Xiaolong Zhang; Xiaohua Lou; Yaling Dou; Xiaomin Shi; Peixiang Lan; Yue Xiao; Laurie Minze; Xian Chang Li
Journal:  J Exp Med       Date:  2018-01-16       Impact factor: 14.307

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  20 in total

1.  Dynamic Chromatin Targeting of BRD4 Stimulates Cardiac Fibroblast Activation.

Authors:  Matthew S Stratton; Rushita A Bagchi; Marina B Felisbino; Rachel A Hirsch; Harrison E Smith; Andrew S Riching; Blake Y Enyart; Keith A Koch; Maria A Cavasin; Michael Alexanian; Kunhua Song; Jun Qi; Madeleine E Lemieux; Deepak Srivastava; Maggie P Y Lam; Saptarsi M Haldar; Charles Y Lin; Timothy A McKinsey
Journal:  Circ Res       Date:  2019-08-14       Impact factor: 17.367

Review 2.  Epigenetic Control of Scleroderma: Current Knowledge and Future Perspectives.

Authors:  Pei-Suen Tsou
Journal:  Curr Rheumatol Rep       Date:  2019-12-07       Impact factor: 4.592

Review 3.  Advances in epigenetics in systemic sclerosis: molecular mechanisms and therapeutic potential.

Authors:  Pei-Suen Tsou; John Varga; Steven O'Reilly
Journal:  Nat Rev Rheumatol       Date:  2021-09-03       Impact factor: 20.543

Review 4.  The Pathophysiological Roles of Regulatory T Cells in the Early Phase of Systemic Sclerosis.

Authors:  Satomi Kobayashi; Yasuo Nagafuchi; Hirofumi Shoda; Keishi Fujio
Journal:  Front Immunol       Date:  2022-05-24       Impact factor: 8.786

5.  TGFβ promotes fibrosis by MYST1-dependent epigenetic regulation of autophagy.

Authors:  Ariella Zehender; Yi-Nan Li; Neng-Yu Lin; Adrian Stefanica; Julian Nüchel; Chih-Wei Chen; Hsiao-Han Hsu; Honglin Zhu; Xiao Ding; Jingang Huang; Lichong Shen; Andrea-Hermina Györfi; Alina Soare; Simon Rauber; Christina Bergmann; Andreas Ramming; Markus Plomann; Beate Eckes; Georg Schett; Jörg H W Distler
Journal:  Nat Commun       Date:  2021-07-20       Impact factor: 14.919

Review 6.  The contribution of epigenetics to the pathogenesis and gender dimorphism of systemic sclerosis: a comprehensive overview.

Authors:  Bianca Saveria Fioretto; Irene Rosa; Eloisa Romano; Yukai Wang; Serena Guiducci; Guohong Zhang; Mirko Manetti; Marco Matucci-Cerinic
Journal:  Ther Adv Musculoskelet Dis       Date:  2020-05-06       Impact factor: 5.346

7.  Transgenic interleukin 11 expression causes cross-tissue fibro-inflammation and an inflammatory bowel phenotype in mice.

Authors:  Wei-Wen Lim; Benjamin Ng; Anissa Widjaja; Chen Xie; Liping Su; Nicole Ko; Sze-Yun Lim; Xiu-Yi Kwek; Stella Lim; Stuart Alexander Cook; Sebastian Schafer
Journal:  PLoS One       Date:  2020-01-09       Impact factor: 3.240

8.  Insulin-like growth factor (IGF)-II- mediated fibrosis in pathogenic lung conditions.

Authors:  Sara M Garrett; Eileen Hsu; Justin M Thomas; Joseph M Pilewski; Carol Feghali-Bostwick
Journal:  PLoS One       Date:  2019-11-25       Impact factor: 3.240

Review 9.  A Metabolic Reprogramming of Glycolysis and Glutamine Metabolism Is a Requisite for Renal Fibrogenesis-Why and How?

Authors:  Timothy D Hewitson; Edward R Smith
Journal:  Front Physiol       Date:  2021-03-17       Impact factor: 4.566

Review 10.  TGFβ-Directed Therapeutics: 2020.

Authors:  Beverly A Teicher
Journal:  Pharmacol Ther       Date:  2020-08-21       Impact factor: 12.310

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