Literature DB >> 31214941

Average Fitness Differences on NK Landscapes.

Wim Hordijk1, Stuart A Kauffman2, Peter F Stadler3,4,5,6,7,8,9,10.   

Abstract

The average fitness difference between adjacent sites in a fitness landscape is an important descriptor that impacts in particular the dynamics of selection/mutation processes on the landscape. Of particular interest is its connection to the error threshold phenomenon. We show here that this parameter is intimately tied to the ruggedness through the landscape's amplitude spectrum. For the NK model, a surprisingly simple analytical estimate explains simulation data with high precision.

Entities:  

Keywords:  Elementary landscape; Error threshold; Fitness landscapes; Graph Laplacian; NK model

Mesh:

Year:  2019        PMID: 31214941     DOI: 10.1007/s12064-019-00296-0

Source DB:  PubMed          Journal:  Theory Biosci        ISSN: 1431-7613            Impact factor:   1.919


  10 in total

1.  Generalized topological spaces in evolutionary theory and combinatorial chemistry.

Authors:  Bärbel M R Stadler; Peter F Stadler
Journal:  J Chem Inf Comput Sci       Date:  2002 May-Jun

2.  Error thresholds in genetic algorithms.

Authors:  Gabriela Ochoa
Journal:  Evol Comput       Date:  2006       Impact factor: 3.277

3.  Local properties of Kauffman's N-k model: A tunably rugged energy landscape.

Authors: 
Journal:  Phys Rev A       Date:  1991-11-15       Impact factor: 3.140

4.  On the behavior of the leading eigenvalue of Eigen's evolutionary matrices.

Authors:  Yuri S Semenov; Alexander S Bratus; Artem S Novozhilov
Journal:  Math Biosci       Date:  2014-10-22       Impact factor: 2.144

Review 5.  Topological features of rugged fitness landscapes in sequence space.

Authors:  Dmitry A Kondrashov; Fyodor A Kondrashov
Journal:  Trends Genet       Date:  2014-10-15       Impact factor: 11.639

6.  Exact results for amplitude spectra of fitness landscapes.

Authors:  Johannes Neidhart; Ivan G Szendro; Joachim Krug
Journal:  J Theor Biol       Date:  2013-05-14       Impact factor: 2.691

7.  Towards a general theory of adaptive walks on rugged landscapes.

Authors:  S Kauffman; S Levin
Journal:  J Theor Biol       Date:  1987-09-07       Impact factor: 2.691

8.  "Surfaces" of selective value.

Authors:  S Wright
Journal:  Proc Natl Acad Sci U S A       Date:  1967-07       Impact factor: 11.205

Review 9.  Selforganization of matter and the evolution of biological macromolecules.

Authors:  M Eigen
Journal:  Naturwissenschaften       Date:  1971-10

Review 10.  Quasispecies made simple.

Authors:  J J Bull; Lauren Ancel Meyers; Michael Lachmann
Journal:  PLoS Comput Biol       Date:  2005-11       Impact factor: 4.475

  10 in total

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