Literature DB >> 31213390

Expanding single-molecule fluorescence spectroscopy to capture complexity in biology.

Junhong Choi1, Rosslyn Grosely2, Elisabetta V Puglisi3, Joseph D Puglisi4.   

Abstract

Fundamental biological processes are driven by diverse molecular machineries. In recent years, single-molecule fluorescence spectroscopy has matured as a unique tool in biology to study how structural dynamics of molecular complexes drive various biochemical reactions. In this review, we highlight underlying developments in single-molecule fluorescence methods that enable deep biological investigations. Recent progress in these methods points toward increasing complexity of measurements to capture biological processes in a living cell, where multiple processes often occur simultaneously and are mechanistically coupled.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31213390      PMCID: PMC6778503          DOI: 10.1016/j.sbi.2019.05.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  53 in total

Review 1.  Three-Dimensional Localization of Single Molecules for Super-Resolution Imaging and Single-Particle Tracking.

Authors:  Lexy von Diezmann; Yoav Shechtman; W E Moerner
Journal:  Chem Rev       Date:  2017-02-02       Impact factor: 60.622

Review 2.  The P Granules of C. elegans: A Genetic Model for the Study of RNA-Protein Condensates.

Authors:  Geraldine Seydoux
Journal:  J Mol Biol       Date:  2018-08-08       Impact factor: 5.469

Review 3.  Visualizing repetitive diffusion activity of double-strand RNA binding proteins by single molecule fluorescence assays.

Authors:  Hye Ran Koh; Xinlei Wang; Sua Myong
Journal:  Methods       Date:  2016-03-21       Impact factor: 3.608

4.  Real-Time Imaging of Translation on Single mRNA Transcripts in Live Cells.

Authors:  Chong Wang; Boran Han; Ruobo Zhou; Xiaowei Zhuang
Journal:  Cell       Date:  2016-05-05       Impact factor: 41.582

5.  Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme.

Authors:  Matthew J Comstock; Kevin D Whitley; Haifeng Jia; Joshua Sokoloski; Timothy M Lohman; Taekjip Ha; Yann R Chemla
Journal:  Science       Date:  2015-04-16       Impact factor: 47.728

6.  Ensemble and Single-Molecule Analysis of Non-Homologous End Joining in Frog Egg Extracts.

Authors:  Thomas G W Graham; Johannes C Walter; Joseph J Loparo
Journal:  Methods Enzymol       Date:  2017-05-15       Impact factor: 1.600

7.  Labeling proteins inside living cells using external fluorophores for microscopy.

Authors:  Kai Wen Teng; Yuji Ishitsuka; Pin Ren; Yeoan Youn; Xiang Deng; Pinghua Ge; Sang Hak Lee; Andrew S Belmont; Paul R Selvin
Journal:  Elife       Date:  2016-12-09       Impact factor: 8.140

8.  NSF-mediated disassembly of on- and off-pathway SNARE complexes and inhibition by complexin.

Authors:  Ucheor B Choi; Minglei Zhao; K Ian White; Richard A Pfuetzner; Luis Esquivies; Qiangjun Zhou; Axel T Brunger
Journal:  Elife       Date:  2018-07-09       Impact factor: 8.140

9.  Kinetics of HIV-1 capsid uncoating revealed by single-molecule analysis.

Authors:  Chantal L Márquez; Derrick Lau; James Walsh; Vaibhav Shah; Conall McGuinness; Andrew Wong; Anupriya Aggarwal; Michael W Parker; David A Jacques; Stuart Turville; Till Böcking
Journal:  Elife       Date:  2018-06-07       Impact factor: 8.140

10.  Dynamic action of the Sec machinery during initiation, protein translocation and termination.

Authors:  Tomas Fessl; Daniel Watkins; Peter Oatley; William John Allen; Robin Adam Corey; Jim Horne; Steve A Baldwin; Sheena E Radford; Ian Collinson; Roman Tuma
Journal:  Elife       Date:  2018-06-07       Impact factor: 8.140

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  2 in total

1.  Single-Molecule Studies of Membrane Receptors from Brain Region Specific Nanovesicles.

Authors:  Surya P Aryal; Xu Fu; Abdullah A Masud; Khaga R Neupane; Christopher I Richards
Journal:  Bio Protoc       Date:  2021-05-20

2.  Spatiotemporally controlled generation of NTPs for single-molecule studies.

Authors:  Anton Sabantsev; Guanzhong Mao; Javier Aguirre Rivera; Mikhail Panfilov; Anatolii Arseniev; Oanh Ho; Mikhail Khodorkovskiy; Sebastian Deindl
Journal:  Nat Chem Biol       Date:  2022-09-21       Impact factor: 16.174

  2 in total

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