Literature DB >> 31209348

Molecular basis for interactions between an acyl carrier protein and a ketosynthase.

Jacob C Milligan1, D John Lee2, David R Jackson3, Andrew J Schaub3, Joris Beld2, Jesus F Barajas1, Joseph J Hale2, Ray Luo1, Michael D Burkart4, Shiou-Chuan Tsai5,6,7.   

Abstract

Fatty acid synthases are dynamic ensembles of enzymes that can biosynthesize long hydrocarbon chains efficiently. Here we visualize the interaction between the Escherichia coli acyl carrier protein (AcpP) and β-ketoacyl-ACP-synthase I (FabB) using X-ray crystallography, NMR, and molecular dynamics simulations. We leveraged this structural information to alter lipid profiles in vivo and provide a molecular basis for how protein-protein interactions can regulate the fatty acid profile in E. coli.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31209348      PMCID: PMC7323458          DOI: 10.1038/s41589-019-0301-y

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  33 in total

1.  One-pot chemo-enzymatic synthesis of reporter-modified proteins.

Authors:  Andrew S Worthington; Michael D Burkart
Journal:  Org Biomol Chem       Date:  2005-11-24       Impact factor: 3.876

2.  Molecular dynamics simulations of the Apo-, Holo-, and acyl-forms of Escherichia coli acyl carrier protein.

Authors:  David I Chan; Thomas Stockner; D Peter Tieleman; Hans J Vogel
Journal:  J Biol Chem       Date:  2008-09-22       Impact factor: 5.157

3.  Analysis and engineering of substrate shuttling by the acyl carrier protein (ACP) in fatty acid synthases (FASs).

Authors:  Emanuele Rossini; Jan Gajewski; Maja Klaus; Gerhard Hummer; Martin Grininger
Journal:  Chem Commun (Camb)       Date:  2018-10-11       Impact factor: 6.222

4.  Acyl Carrier Protein Cyanylation Delivers a Ketoacyl Synthase-Carrier Protein Cross-Link.

Authors:  Grace A R Thiele; Connie P Friedman; Kathleen J S Tsai; Joris Beld; Casey H Londergan; Louise K Charkoudian
Journal:  Biochemistry       Date:  2017-05-08       Impact factor: 3.162

Review 5.  The structural role of the carrier protein--active controller or passive carrier.

Authors:  John Crosby; Matthew P Crump
Journal:  Nat Prod Rep       Date:  2012-08-24       Impact factor: 13.423

6.  Acyl carrier protein from Escherichia coli.

Authors:  C O Rock; J E Cronan
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

7.  Visualizing the chain-flipping mechanism in fatty-acid biosynthesis.

Authors:  Joris Beld; Hu Cang; Michael D Burkart
Journal:  Angew Chem Int Ed Engl       Date:  2014-10-29       Impact factor: 15.336

8.  Thermal modulation of fatty acid synthesis in Escherichia coli does not involve de novo enzyme synthesis.

Authors:  J L Garwin; J E Cronan
Journal:  J Bacteriol       Date:  1980-03       Impact factor: 3.490

9.  Escherichia coli unsaturated fatty acid synthesis: complex transcription of the fabA gene and in vivo identification of the essential reaction catalyzed by FabB.

Authors:  Youjun Feng; John E Cronan
Journal:  J Biol Chem       Date:  2009-08-13       Impact factor: 5.157

10.  In vivo functional analyses of the type II acyl carrier proteins of fatty acid biosynthesis.

Authors:  Nicholas R De Lay; John E Cronan
Journal:  J Biol Chem       Date:  2007-05-23       Impact factor: 5.157

View more
  18 in total

1.  Modular polyketide synthase contains two reaction chambers that operate asynchronously.

Authors:  Saket R Bagde; Irimpan I Mathews; J Christopher Fromme; Chu-Young Kim
Journal:  Science       Date:  2021-11-04       Impact factor: 47.728

2.  Escherichia coli Nissle 1917 secondary metabolism: aryl polyene biosynthesis and phosphopantetheinyl transferase crosstalk.

Authors:  Courtney V Jones; Brianna G Jarboe; Haley M Majer; Amy T Ma; Joris Beld
Journal:  Appl Microbiol Biotechnol       Date:  2021-09-21       Impact factor: 4.813

3.  Priming enzymes from the pikromycin synthase reveal how assembly-line ketosynthases catalyze carbon-carbon chemistry.

Authors:  Miles S Dickinson; Takeshi Miyazawa; Ryan S McCool; Adrian T Keatinge-Clay
Journal:  Structure       Date:  2022-06-22       Impact factor: 5.871

4.  Structure and mechanistic analyses of the gating mechanism of elongating ketosynthases.

Authors:  Jeffrey T Mindrebo; Aochiu Chen; Woojoo E Kim; Rebecca N Re; Tony D Davis; Joseph P Noel; Michael D Burkart
Journal:  ACS Catal       Date:  2021-05-26       Impact factor: 13.700

5.  Mechanism-based cross-linking probes capture the Escherichia coli ketosynthase FabB in conformationally distinct catalytic states.

Authors:  Aochiu Chen; Jeffrey T Mindrebo; Tony D Davis; Woojoo E Kim; Yohei Katsuyama; Ziran Jiang; Yasuo Ohnishi; Joseph P Noel; Michael D Burkart
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-08-30       Impact factor: 5.699

6.  Interfacial plasticity facilitates high reaction rate of E. coli FAS malonyl-CoA:ACP transacylase, FabD.

Authors:  Laetitia E Misson; Jeffrey T Mindrebo; Tony D Davis; Ashay Patel; J Andrew McCammon; Joseph P Noel; Michael D Burkart
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-14       Impact factor: 11.205

7.  Antibody Probes of Module 1 of the 6-Deoxyerythronolide B Synthase Reveal an Extended Conformation During Ketoreduction.

Authors:  Dillon P Cogan; Xiuyuan Li; Natalia Sevillano; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla
Journal:  J Am Chem Soc       Date:  2020-08-18       Impact factor: 15.419

8.  A kinetic rationale for functional redundancy in fatty acid biosynthesis.

Authors:  Sophia Ruppe; Kathryn Mains; Jerome M Fox
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-03       Impact factor: 12.779

9.  Elucidation of transient protein-protein interactions within carrier protein-dependent biosynthesis.

Authors:  Thomas G Bartholow; Terra Sztain; Ashay Patel; D John Lee; Megan A Young; Ruben Abagyan; Michael D Burkart
Journal:  Commun Biol       Date:  2021-03-16

Review 10.  Probing the structure and function of acyl carrier proteins to unlock the strategic redesign of type II polyketide biosynthetic pathways.

Authors:  Ariana Sulpizio; Callie E W Crawford; Rebecca S Koweek; Louise K Charkoudian
Journal:  J Biol Chem       Date:  2021-01-23       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.