Literature DB >> 31204062

The transcriptome landscape associated with Disrupted-in-Schizophrenia-1 locus impairment in early development and adulthood.

Kun Yang1, Mari A Kondo1, Hanna Jaaro-Peled1, Tyler Cash-Padgett1, Shin-Ichi Kano1, Koko Ishizuka1, Jonathan Pevsner2, Toshifumi Tomoda3, Akira Sawa4, Minae Niwa5.   

Abstract

DISC1 was originally expected to be a genetic risk factor for schizophrenia, but the genome wide association studies have not supported this idea. In contrast, neurobiological studies of DISC1 in cell and animal models have demonstrated that direct perturbation of DISC1 protein elicits neurobiological and behavioral abnormalities relevant to a wide range of psychiatric conditions, in particular psychosis. Thus, the utility of DISC1 as a biological lead for psychosis research is clear. In the present study, we aimed to capture changes in the molecular landscape in the prefrontal cortex upon perturbation of DISC1, using the Disc1 locus impairment (Disc1-LI) model in which the majority of Disc1 isoforms have been depleted, and to explore potential molecular mediators relevant to psychiatric conditions. We observed a robust change in gene expression profile elicited by Disc1-LI in which the stronger effects on molecular networks were observed in early stage compared with those in adulthood. Significant alterations were found in specific pathways relevant to psychiatric conditions, such as pathways of signaling by G protein-coupled receptor, neurotransmitter release cycle, and voltage gated potassium channels. The differentially expressed genes (DEGs) between Disc1-LI and wild-type mice are significantly enriched not only in neurons, but also in astrocytes and oligodendrocyte precursor cells. The brain-disorder-associated genes at the mRNA and protein levels rather than those at the genomic levels are enriched in the DEGs. Together, our present study supports the utility of Disc1-LI mice in biological research for psychiatric disorder-associated molecular networks.
Copyright © 2019. Published by Elsevier B.V.

Entities:  

Keywords:  DISC1; Mouse model; Neurodevelopment; Prefrontal cortex; RNA sequencing

Mesh:

Substances:

Year:  2019        PMID: 31204062      PMCID: PMC8050833          DOI: 10.1016/j.schres.2019.05.032

Source DB:  PubMed          Journal:  Schizophr Res        ISSN: 0920-9964            Impact factor:   4.939


  56 in total

1.  The sva package for removing batch effects and other unwanted variation in high-throughput experiments.

Authors:  Jeffrey T Leek; W Evan Johnson; Hilary S Parker; Andrew E Jaffe; John D Storey
Journal:  Bioinformatics       Date:  2012-01-17       Impact factor: 6.937

2.  Disrupted in schizophrenia 1 (DISC1): subcellular targeting and induction of ring mitochondria.

Authors:  J Kirsty Millar; Rachel James; Sheila Christie; David J Porteous
Journal:  Mol Cell Neurosci       Date:  2005-10-04       Impact factor: 4.314

3.  TAR DNA-Binding Protein 43 and Disrupted in Schizophrenia 1 Coaggregation Disrupts Dendritic Local Translation and Mental Function in Frontotemporal Lobar Degeneration.

Authors:  Ryo Endo; Noriko Takashima; Yoko Nekooki-Machida; Yusuke Komi; Kelvin Kai-Wan Hui; Masaki Takao; Hiroyasu Akatsu; Shigeo Murayama; Akira Sawa; Motomasa Tanaka
Journal:  Biol Psychiatry       Date:  2018-03-29       Impact factor: 13.382

4.  Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown.

Authors:  Mihaela Pertea; Daehwan Kim; Geo M Pertea; Jeffrey T Leek; Steven L Salzberg
Journal:  Nat Protoc       Date:  2016-08-11       Impact factor: 13.491

5.  Subcortical dopaminergic deficits in a DISC1 mutant model: a study in direct reference to human molecular brain imaging.

Authors:  Hanna Jaaro-Peled; Minae Niwa; Catherine A Foss; Rina Murai; Samantha de Los Reyes; Atsushi Kamiya; Yolanda Mateo; Patricio O'Donnell; Nicola G Cascella; Toshitaka Nabeshima; Tomás R Guilarte; Martin G Pomper; Akira Sawa
Journal:  Hum Mol Genet       Date:  2013-01-11       Impact factor: 6.150

6.  Endogenous Cell Type-Specific Disrupted in Schizophrenia 1 Interactomes Reveal Protein Networks Associated With Neurodevelopmental Disorders.

Authors:  Brent Wilkinson; Oleg V Evgrafov; DongQing Zheng; Nicolas Hartel; James A Knowles; Nicholas A Graham; Justin K Ichida; Marcelo P Coba
Journal:  Biol Psychiatry       Date:  2018-05-23       Impact factor: 13.382

7.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

8.  Post-mortem molecular profiling of three psychiatric disorders.

Authors:  Ryne C Ramaker; Kevin M Bowling; Brittany N Lasseigne; Megan H Hagenauer; Andrew A Hardigan; Nicholas S Davis; Jason Gertz; Preston M Cartagena; David M Walsh; Marquis P Vawter; Edward G Jones; Alan F Schatzberg; Jack D Barchas; Stanley J Watson; Blynn G Bunney; Huda Akil; William E Bunney; Jun Z Li; Sara J Cooper; Richard M Myers
Journal:  Genome Med       Date:  2017-07-28       Impact factor: 11.117

9.  Transient Knock-Down of Prefrontal DISC1 in Immune-Challenged Mice Causes Abnormal Long-Range Coupling and Cognitive Dysfunction throughout Development.

Authors:  Xiaxia Xu; Mattia Chini; Sebastian H Bitzenhofer; Ileana L Hanganu-Opatz
Journal:  J Neurosci       Date:  2019-01-07       Impact factor: 6.167

Review 10.  The importance of p53 pathway genetics in inherited and somatic cancer genomes.

Authors:  Giovanni Stracquadanio; Xuting Wang; Marsha D Wallace; Anna M Grawenda; Ping Zhang; Juliet Hewitt; Jorge Zeron-Medina; Francesc Castro-Giner; Ian P Tomlinson; Colin R Goding; Kamil J Cygan; William G Fairbrother; Laurent F Thomas; Pål Sætrom; Federica Gemignani; Stefano Landi; Benjamin Schuster-Böckler; Douglas A Bell; Gareth L Bond
Journal:  Nat Rev Cancer       Date:  2016-04       Impact factor: 60.716

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  1 in total

Review 1.  Mutations in DISC1 alter IP3R and voltage-gated Ca2+ channel functioning, implications for major mental illness.

Authors:  Ann R Rittenhouse; Sonia Ortiz-Miranda; Agata Jurczyk
Journal:  Neuronal Signal       Date:  2021-12-07
  1 in total

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