Literature DB >> 31194289

A modular laboratory course using planarians to study genes involved in tissue regeneration.

Stacy D Ochoa1,2, Michael R Dores2,3, John M Allen1, Tuan Tran1, Maryan Osman1, Nidia P Vázquez Castellanos1, JoAnn Trejo2, Ricardo M Zayas1.   

Abstract

Undergraduate research experiences are excellent opportunities to engage students in science alongside experienced scientists, but at large institutions, it is challenging to accommodate all students. To address and engage a larger number of students, we developed a modular laboratory course based on the course-based undergraduate research experiences model. This new course was integrated with the scientific aims of a research laboratory studying the cellular and molecular mechanisms underlying tissue regeneration in planarians. In this course, students were asked to identify genes with roles in planarian biology. Students analyzed and cloned an assigned gene, determined its expression pattern in situ and examined its function in regeneration. Additionally, we developed critical thinking and scientific communication skills by incorporating activities focused on critical concepts. Students obtained high quality primary data and were successful in completing and mastering the course learning outcomes. They benefitted by developing basic research skills, learning to perform, trouble-shooting experiments, reading and critically analyzing primary literature, and using the information to defend and explain their experimental results. Through this course, students also increased their confidence and ability to perform independent scientific research. The course was designed to make it accessible to the community to implement and adapt as appropriate in diverse institutions.
© 2019 International Union of Biochemistry and Molecular Biology, 47(5):547-559, 2019. © 2019 International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  Undergraduate; course-based undergraduate research experience; planarians; stem cells

Mesh:

Year:  2019        PMID: 31194289      PMCID: PMC6731126          DOI: 10.1002/bmb.21259

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  36 in total

1.  Increased structure and active learning reduce the achievement gap in introductory biology.

Authors:  David C Haak; Janneke HilleRisLambers; Emile Pitre; Scott Freeman
Journal:  Science       Date:  2011-06-03       Impact factor: 47.728

2.  An Inquiry-Based Approach to Study the Synapse: Student-Driven Experiments Using C. elegans.

Authors:  Michele L Lemons
Journal:  J Undergrad Neurosci Educ       Date:  2016-04-15

Review 3.  The history and enduring contributions of planarians to the study of animal regeneration.

Authors:  Sarah A Elliott; Alejandro Sánchez Alvarado
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2012-07-23       Impact factor: 5.814

4.  Using Zebrafish to Implement a Course-Based Undergraduate Research Experience to Study Teratogenesis in Two Biology Laboratory Courses.

Authors:  Swapnalee Sarmah; Grady W Chism; Martin A Vaughan; Pooja Muralidharan; Jim A Marrs; Kathleen A Marrs
Journal:  Zebrafish       Date:  2016-02-01       Impact factor: 1.985

5.  The python project: a unique model for extending research opportunities to undergraduate students.

Authors:  Pamela A Harvey; Christopher Wall; Stephen W Luckey; Stephen Langer; Leslie A Leinwand
Journal:  CBE Life Sci Educ       Date:  2014       Impact factor: 3.325

6.  Light-induced depigmentation in planarians models the pathophysiology of acute porphyrias.

Authors:  Bradford M Stubenhaus; John P Dustin; Emily R Neverett; Megan S Beaudry; Leanna E Nadeau; Ethan Burk-McCoy; Xinwen He; Bret J Pearson; Jason Pellettieri
Journal:  Elife       Date:  2016-05-31       Impact factor: 8.140

7.  In situ hybridization protocol for enhanced detection of gene expression in the planarian Schmidtea mediterranea.

Authors:  Ryan S King; Phillip A Newmark
Journal:  BMC Dev Biol       Date:  2013-03-12       Impact factor: 1.978

8.  HOX gene complement and expression in the planarian Schmidtea mediterranea.

Authors:  Ko W Currie; David D R Brown; Shujun Zhu; ChangJiang Xu; Veronique Voisin; Gary D Bader; Bret J Pearson
Journal:  Evodevo       Date:  2016-03-30       Impact factor: 2.250

9.  PlanMine--a mineable resource of planarian biology and biodiversity.

Authors:  Holger Brandl; HongKee Moon; Miquel Vila-Farré; Shang-Yun Liu; Ian Henry; Jochen C Rink
Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

10.  Participation in a Year-Long CURE Embedded into Major Core Genetics and Cellular and Molecular Biology Laboratory Courses Results in Gains in Foundational Biological Concepts and Experimental Design Skills by Novice Undergraduate Researchers.

Authors:  Marcy A Peteroy-Kelly; Matthew R Marcello; Erika Crispo; Zafir Buraei; Daniel Strahs; Marisa Isaacson; Leslie Jaworski; David Lopatto; David Zuzga
Journal:  J Microbiol Biol Educ       Date:  2017-04-21
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