Literature DB >> 26829498

Using Zebrafish to Implement a Course-Based Undergraduate Research Experience to Study Teratogenesis in Two Biology Laboratory Courses.

Swapnalee Sarmah1, Grady W Chism1, Martin A Vaughan1, Pooja Muralidharan1, Jim A Marrs1, Kathleen A Marrs1.   

Abstract

A course-based undergraduate research experience (CURE) spanning three semesters was introduced into freshman and sophomore biology classes, with the hypothesis that participation in a CURE affects skills in research, communication, and collaboration, which may help students persist in science. Student research projects were centered on the hypothesis that nicotine and caffeine exposure during early development affects gastrulation and heart development in zebrafish. First, freshmen generated original data showing distinct effects of embryonic nicotine and caffeine exposure on zebrafish heart development and function. Next, Cell Biology laboratory students continued the CURE studies and identified novel teratogenic effects of nicotine and caffeine during gastrulation. Finally, new freshmen continued the CURE research, examining additional toxicant effects on development. Students designed new protocols, made measurements, presented results, and generated high-quality preliminary data that were studied in successive semesters. By implementing this project, the CURE extended faculty research and provided a scalable model to address national goals to involve more undergraduates in authentic scientific research. In addition, student survey results support the hypothesis that CUREs provide significant gains in student ability to (1) design experiments, (2) analyze data, and (3) make scientific presentations, translating into high student satisfaction and enhanced learning.

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Year:  2016        PMID: 26829498      PMCID: PMC5911693          DOI: 10.1089/zeb.2015.1107

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  40 in total

1.  The pipeline. Benefits of undergraduate research experiences.

Authors:  Susan H Russell; Mary P Hancock; James McCullough
Journal:  Science       Date:  2007-04-27       Impact factor: 47.728

2.  Integrating research and education at research-extensive universities with research-intensive communities.

Authors:  Ketaki V Desai; Sarah N Gatson; Thomas W Stiles; Randolph H Stewart; Glen A Laine; Christopher M Quick
Journal:  Adv Physiol Educ       Date:  2008-06       Impact factor: 2.288

Review 3.  Innovations in teaching undergraduate biology and why we need them.

Authors:  William B Wood
Journal:  Annu Rev Cell Dev Biol       Date:  2009       Impact factor: 13.827

Review 4.  Education. Undergraduate research experiences: impacts and opportunities.

Authors:  Marcia C Linn; Erin Palmer; Anne Baranger; Elizabeth Gerard; Elisa Stone
Journal:  Science       Date:  2015-02-06       Impact factor: 47.728

5.  Maternal exposure of rats to nicotine via infusion during gestation produces neurobehavioral deficits and elevated expression of glial fibrillary acidic protein in the cerebellum and CA1 subfield in the offspring at puberty.

Authors:  Ali Abdel-Rahman; Anjelika M Dechkovskaia; Jazmine M Sutton; Wei-Chung Chen; Xiangrong Guan; Wasiuddin A Khan; Mohamed B Abou-Donia
Journal:  Toxicology       Date:  2005-05-05       Impact factor: 4.221

6.  The genomics education partnership: successful integration of research into laboratory classes at a diverse group of undergraduate institutions.

Authors:  Christopher D Shaffer; Consuelo Alvarez; Cheryl Bailey; Daron Barnard; Satish Bhalla; Chitra Chandrasekaran; Vidya Chandrasekaran; Hui-Min Chung; Douglas R Dorer; Chunguang Du; Todd T Eckdahl; Jeff L Poet; Donald Frohlich; Anya L Goodman; Yuying Gosser; Charles Hauser; Laura L M Hoopes; Diana Johnson; Christopher J Jones; Marian Kaehler; Nighat Kokan; Olga R Kopp; Gary A Kuleck; Gerard McNeil; Robert Moss; Jennifer L Myka; Alexis Nagengast; Robert Morris; Paul J Overvoorde; Elizabeth Shoop; Susan Parrish; Kelynne Reed; E Gloria Regisford; Dennis Revie; Anne G Rosenwald; Ken Saville; Stephanie Schroeder; Mary Shaw; Gary Skuse; Christopher Smith; Mary Smith; Eric P Spana; Mary Spratt; Joyce Stamm; Jeff S Thompson; Matthew Wawersik; Barbara A Wilson; Jim Youngblom; Wilson Leung; Jeremy Buhler; Elaine R Mardis; David Lopatto; Sarah C R Elgin
Journal:  CBE Life Sci Educ       Date:  2010       Impact factor: 3.325

7.  Human Brains Engaged in Rat Brains: Student-driven Neuroanatomy Research in an Introductory Biology Lab Course.

Authors:  Stephanie M Gardner; Omolola A Adedokun; Gabriela C Weaver; Edward L Bartlett
Journal:  J Undergrad Neurosci Educ       Date:  2011-10-15

8.  Classroom-based science research at the introductory level: changes in career choices and attitude.

Authors:  Melinda Harrison; David Dunbar; Lisa Ratmansky; Kimberly Boyd; David Lopatto
Journal:  CBE Life Sci Educ       Date:  2011       Impact factor: 3.325

9.  A central support system can facilitate implementation and sustainability of a Classroom-based Undergraduate Research Experience (CURE) in Genomics.

Authors:  David Lopatto; Charles Hauser; Christopher J Jones; Don Paetkau; Vidya Chandrasekaran; David Dunbar; Christy MacKinnon; Joyce Stamm; Consuelo Alvarez; Daron Barnard; James E J Bedard; April E Bednarski; Satish Bhalla; John M Braverman; Martin Burg; Hui-Min Chung; Randall J DeJong; Justin R DiAngelo; Chunguang Du; Todd T Eckdahl; Julia Emerson; Amy Frary; Donald Frohlich; Anya L Goodman; Yuying Gosser; Shubha Govind; Adam Haberman; Amy T Hark; Arlene Hoogewerf; Diana Johnson; Lisa Kadlec; Marian Kaehler; S Catherine Silver Key; Nighat P Kokan; Olga R Kopp; Gary A Kuleck; Jane Lopilato; Juan C Martinez-Cruzado; Gerard McNeil; Stephanie Mel; Alexis Nagengast; Paul J Overvoorde; Susan Parrish; Mary L Preuss; Laura D Reed; E Gloria Regisford; Dennis Revie; Srebrenka Robic; Jennifer A Roecklien-Canfield; Anne G Rosenwald; Michael R Rubin; Kenneth Saville; Stephanie Schroeder; Karim A Sharif; Mary Shaw; Gary Skuse; Christopher D Smith; Mary Smith; Sheryl T Smith; Eric P Spana; Mary Spratt; Aparna Sreenivasan; Jeffrey S Thompson; Matthew Wawersik; Michael J Wolyniak; James Youngblom; Leming Zhou; Jeremy Buhler; Elaine Mardis; Wilson Leung; Christopher D Shaffer; Jennifer Threlfall; Sarah C R Elgin
Journal:  CBE Life Sci Educ       Date:  2014       Impact factor: 3.325

10.  Ethanol exposure disrupts extraembryonic microtubule cytoskeleton and embryonic blastomere cell adhesion, producing epiboly and gastrulation defects.

Authors:  Swapnalee Sarmah; Pooja Muralidharan; Courtney L Curtis; Jeanette N McClintick; Bryce B Buente; David J Holdgrafer; Osato Ogbeifun; Opeyemi C Olorungbounmi; Liliana Patino; Ryan Lucas; Sonya Gilbert; Evan S Groninger; Julia Arciero; Howard J Edenberg; James A Marrs
Journal:  Biol Open       Date:  2013-08-14       Impact factor: 2.422

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  12 in total

1.  A modular laboratory course using planarians to study genes involved in tissue regeneration.

Authors:  Stacy D Ochoa; Michael R Dores; John M Allen; Tuan Tran; Maryan Osman; Nidia P Vázquez Castellanos; JoAnn Trejo; Ricardo M Zayas
Journal:  Biochem Mol Biol Educ       Date:  2019-06-13       Impact factor: 1.160

2.  Turmeric Extract Rescues Ethanol-Induced Developmental Defect in the Zebrafish Model for Fetal Alcohol Spectrum Disorder (FASD).

Authors:  Pooja Muralidharan; Craig T Connors; Arooj S Mohammed; Swapnalee Sarmah; Kathleen Marrs; James A Marrs; Grady W Chism
Journal:  J Food Sci       Date:  2017-08-10       Impact factor: 3.167

Review 3.  Zebrafish as a Vertebrate Model System to Evaluate Effects of Environmental Toxicants on Cardiac Development and Function.

Authors:  Swapnalee Sarmah; James A Marrs
Journal:  Int J Mol Sci       Date:  2016-12-16       Impact factor: 5.923

4.  Implementation of a Collaborative Series of Classroom-Based Undergraduate Research Experiences Spanning Chemical Biology, Biochemistry, and Neurobiology.

Authors:  Jennifer R Kowalski; Geoffrey C Hoops; R Jeremy Johnson
Journal:  CBE Life Sci Educ       Date:  2016       Impact factor: 3.325

5.  Broadening the voice of science: Promoting scientific communication in the undergraduate classroom.

Authors:  Lauren A Cirino; Zachary Emberts; Paul N Joseph; Pablo E Allen; David Lopatto; Christine W Miller
Journal:  Ecol Evol       Date:  2017-10-24       Impact factor: 2.912

6.  Propelling a Course-Based Undergraduate Research Experience Using an Open-Access Online Undergraduate Research Journal.

Authors:  Evelyn Sun; Marcia L Graves; David C Oliver
Journal:  Front Microbiol       Date:  2020-11-23       Impact factor: 5.640

7.  Multi-Institutional, Multidisciplinary Study of the Impact of Course-Based Research Experiences.

Authors:  Catherine M Mader; Christopher W Beck; Wendy H Grillo; Gail P Hollowell; Bettye S Hennington; Nancy L Staub; Veronique A Delesalle; Denise Lello; Robert B Merritt; Gerald D Griffin; Chastity Bradford; Jinghe Mao; Lawrence S Blumer; Sandra L White
Journal:  J Microbiol Biol Educ       Date:  2017-09-01

8.  First Year Course-Based Undergraduate Research Experience (CURE) Using the CRISPR/Cas9 Genome Engineering Technology in Zebrafish.

Authors:  Jay M Bhatt; Anil Kumar Challa
Journal:  J Microbiol Biol Educ       Date:  2017-01-29

9.  Current Approaches for Integrating Responsible and Ethical Conduct of Research (RECR) Education into Course-based Undergraduate Research Experiences: A National Assessment.

Authors:  Laura A Diaz-Martinez; Aimee A Hernandez; Christina E D'Arcy; Stephanie Corral; Jay M Bhatt; David Esparza; Martina Rosenberg; Jeffrey T Olimpo
Journal:  CBE Life Sci Educ       Date:  2021-09       Impact factor: 3.325

10.  Characterization of Instructor and Student Behaviors in CURE and Non-CURE Learning Environments: Impacts on Student Motivation, Science Identity Development, and Perceptions of the Laboratory Experience.

Authors:  David Esparza; Amy E Wagler; Jeffrey T Olimpo
Journal:  CBE Life Sci Educ       Date:  2020-03       Impact factor: 3.325

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