| Literature DB >> 31191068 |
Alexandre Sostelly1, François Mercier1.
Abstract
INTRODUCTION: Ovarian cancer is now recognized as a constellation of distinct subtypes of neoplasia involving the ovary and related structures. As a consequence of this heterogeneity, the analysis of covariates influencing the overall survival is crucial in this disease segment. In this work, an overall survival model incorporating tumor kinetics metrics in patients with platinum-resistant ovarian cancer was developed from the randomized, open label, phase 3 AURELIA trial.Entities:
Keywords: angiogenesis; anti-angiogenesis; ovarian cancer; overall survival; therapy; tumor kinetics
Year: 2019 PMID: 31191068 PMCID: PMC6540487 DOI: 10.1177/1179554919852071
Source DB: PubMed Journal: Clin Med Insights Oncol ISSN: 1179-5549
Demographic and baseline patient characteristics.
| CT (n=182) | B + CT (n=179) | |
|---|---|---|
| Age (median, range in years) | 61.0 [25, 84] | 62 [25, 80] |
| Origin of cancer: Ovary | 86% | 93% |
| Histology type: Serous | 84% | 87% |
| ECOG status: 0 | 54% | 60% |
| Pre-treatment SLD (median, range in mm) | 56.5 [10, 370] | 54 [10, 314] |
Abbreviations: B, bevacizumab; CT, chemotherapy; ECOG, Eastern Cooperative Oncology Group; SLD, sum of longest diameters.
TK model parameter estimates.
| Parameter | Group | Estimate | %IIV[ | Shrink.[ | Median bootstrap values[ |
|---|---|---|---|---|---|
| SLD increase rate, day−1 ( | 4.98 × 10−4 (25) | 138.5 (10) | 38.4 | 4.8 × 10−4 [2.6 × 10−4, 8 × 10−4] | |
| SLD decrease rate, day−1 ( | 6.98 × 10−3 (18) | 85.6 (11) | 41.8 | 7.12 × 10−3 [5.1 × 10−3, 1.0 × 10−2] | |
| Baseline, mm ( | 55.5 (5) | 82.8 (4) | 6.0 | 55.4 [50.68, 60.23] | |
| Resistance rate, day−1 ( | Paclitaxel + B | 3.87 × 10−2 (45) | 149.6 (13) | 42.9 | 4.6 × 10−2 [2.2 × 10−2, 2.23 × 10−1] |
| PLD + B | 7.25 × 10−3 (32) | 7.62 × 10−3 [3.81 × 10−3, 1.31 × 10−2] | |||
| Topotecan + B | 3.28 × 10−2 (38) | 3.74 × 10−2 [1.7 × 10−2, 9.5 × 10−2] | |||
| Paclitaxel | 7.99 × 10−2 (40) | 9.06 × 10−2 [3.5 × 10−2, 2.5 × 10−1] | |||
| PLD | 2.48 × 10−2 (32) | 2.56 × 10−2 [1.4 × 10−2, 4.4 × 10−2] | |||
| Topotecan | 1.30 × 10−1 (59) | 1.62 × 10−1 [6.0 × 10−2, 8.0 × 10−1] | |||
| Residual error, mm | 8.41 (8) | NA | 26.3 | 8.42 [7.11, 9.78] |
Model parameter estimates and their respective 90% confidence intervals generated by bootstrapping are presented in Table A1. Median bootstrap values were close to the values estimated from the original dataset indicating a small bias. Parameters were estimated with adequate precision and low shrinkage.
RSE: relative standard error.
%IIV: inter-individual variability expressed as % coefficient of variation.
Shrink.: parameter estimate shrinkage.
10% trimmed median derived from 100 bootstrap replicates.
Figure A1.Goodness-of-fit of the final model to the SLD values for a random sample of 9 patients from the AURELIA study. The curve depicts the model predicted SLD over time. The dots are the observations. SLD indicates sum of longest diameters.
Figure A2.Goodness-of-fit of the final model to the SD values: observations vs individual model predicted SLD. SLD indicates sum of longest diameters.
Figure A3.Goodness-of-fit of the final model to the SD values: Q-Q plot of CWRES.
Figure A4.Goodness-of-fit of the final model to the SD values: CWRES.
Figure A5.Distributions of observed vs predicted SLD values obtained from the “baseline” scan and from the first scan on treatment (at week 8).
Tumor kinetics metrics per treatment group.
| CT (n=140) | B + CT (n=134) | |
|---|---|---|
| −5.0 [–1.3, –21.0] | −17.9 [–9.5, –30.2] | |
| −5.8 [–3.1, –26.7] | −22.0 [–9.9, –50.6] | |
| 4.3 [2.5, 19.2] | 17.5 [8.4, 40.9] |
Abbreviations: B, bevacizumab; CT, chemotherapy; TTG, time to (re-)growth; SLD, sum of longest diameters.
: model-predicted percentage change between predicted baseline SLD value and predicted SLD value at week 8.
: model-predicted percentage change between predicted baseline SLD value and predicted minimum SLD value on treatment.
: time to reach the predicted minimum SLD value on treatment.
Figure A6.Histogram of ETS8.
Boostrap-based covariate analysis.
| > cox<-coxph(Surv(OS, OSC==0)~as.factor(TRTC)+as.factor(BECOG)+as.factor(HGRAD)+ | ||||||
| Covariates selected | ||||||
| (%) | ||||||
| as.factor(ASCITES) ETS8logPREDBASEas.factor(BECOG)as.factor(FIGO4)as.factor(FIGO2)as.factor(FIGO3)as.factor(SEROUS)as.factor(FIGO1)as.factor(TRTC)as.factor(HGRAD)as.factor(LTHER)as.factor(cDIAG)cAGEBLCA125 | 100.00100.00100.0092.9472.9455.2954.1250.5949.4130.5929.4128.2424.7118.828.24 | |||||
| Coefficients Sign | ||||||
| + (%) | - (%) | |||||
| as.factor(ASCITES)1as.factor(BECOG)1as.factor(BECOG)99as.factor(FIGO4)1ETS8logPREDBASEas.factor(LTHER)2as.factor(HGRAD)1cAGEas.factor(FIGO3)1as.factor(FIGO1)1BLCA125as.factor(TRTC)CT+BVas.factor(cDIAG)1as.factor(FIGO2)1as.factor(SEROUS)1 | 100.00100.00100.00100.00100.0098.8295.8384.0081.2550.0045.2428.5715.389.528.510.00 | 0.000.000.000.000.001.184.1716.0018.7550.0054.7671.4384.6290.4891.49100.00 | ||||
| Stat Significance | ||||||
| (%) | ||||||
| as.factor(ASCITES)1ETS8as.factor(BECOG)1as.factor(FIGO4)1as.factor(FIGO3)1logPREDBASEas.factor(SEROUS)1as.factor(FIGO2)1as.factor(HGRAD)1as.factor(cDIAG)1as.factor(FIGO1)1as.factor(LTHER)2as.factor(TRTC)CT+BVas.factor(BECOG)99BLCA125cAGE | 96.4783.5360.7651.6132.6131.7613.9512.778.004.764.764.173.851.540.000.00 | |||||
| The stepAIC() for the original data-set gave | ||||||
| coef | exp(coef) | se(coef) | z | p | ||
| as.factor(BECOG)1as.factor(SEROUS)1as.factor(ASCITES)1as.factor(FIGO2)1as.factor(FIGO4)1logPREDBASEETS8 | 0.51782-0.236560.79617-0.805680.557780.268280.02279 | 1.678360.789342.217030.446791.746801.307721.02305 | 0.152230.160490.164690.510750.165190.097060.00447 | 3.40-1.474.83-1.583.382.765.10 | 0.000670.140501.3e-060.114690.000730.005713.3e-07 | |
| Likelihood ratio test=105 on 7 df, p=0 | ||||||
| Step | Df | Deviance Resid. | Df | Resid. Dev | AIC | |
| 12 - BLCA1253 - as.factor(FIGO1)4 - as.factor(TRTC)5 - cAGE6 - as.factor(HGRAD)7 - as.factor(FIGO3)8 - as.factor(cDIAG)9 - as.factor(LTHER) | 11111111 | 0.025598670.028463040.118636960.195748180.259081380.509174550.818393840.35617270 | 255256257258259260261262263 | 1813.6331813.6581813.6871813.8051814.0011814.2601814.7691815.5881815.944 | 1843.6331841.6581839.6871837.8051836.0011834.2601832.7691831.5881829.944 | |
| There were 50 or more warnings (use warnings[] to see the first 50) | ||||||
Parameter estimates () of the final overall survival model.
|
|
| |
|---|---|---|
| ECOG = 1, 2, 3 (ref. = 0) | 1.01 | [0.99, 1.02] |
| Serous = Yes (ref. = no) | 0.77 | [0.55, 1.06] |
| Presence of ascites (ref. = absence) | 2.36 | [1.71, 3.27] |
| FIGO stage | ||
| I | 1.28 | [0.28, 5.76] |
| II | 0.77 | [0.14, 4.28] |
| III | 1.72 | [0.42, 7.11] |
| IV | 2.98 | [0.71, 12.6] |
| 1.38 | [1.13, 1.68] | |
| 1.03 | [1.02, 1.04] | |
Abbreviations: CI, confidence interval; ECOG, Eastern Cooperative Oncology Group; FIGO, Féderation Internationale de Gynécologie et d’Obstétrique; SLD, sum of longest diameters.
: model-predicted SLD value at time of treatment onset.
: model-predicted early tumor shrinkage (%) at week 8.
Figure 1.Concordance index (overall c-index) obtained with different OS models.
Figure 2.Predicted probability of survival for various levels of (%) in absence of ascites.
Shaded areas correspond to the parametric 95% confidence interval around the mean probability.
| Model number | Description | AIC | Successful estimation of standard errors |
|---|---|---|---|
| Model 1 | Stein Model[ | 8551 | Y |
| Model 2 | Wang Model[ | 8935 | Y |
| Model 3 | Claret Model[ | 8545 | Y |
| Model 4 | Model 3 + Arm as binary covariate (B + CT vs CT) on | 8529 | Y |
| Model 5 | Model 3 + Arm as binary covariate (B + CT vs CT) on | 8534 | Y |
| Model 6 | Model 3 + Arm as binary covariate (B + CT vs CT) on | 8536 | Y |
| Model 7 | Model 3 + Each treatment as binary covariate (B + paclitaxel, B + PLD, B + topotecan, paclitaxel, PLD, topotecan) on | 8517 | Y |
| Model 8 |
|
|
|
| Model 9 | Model 3 + Each treatment as binary covariate (B + paclitaxel, B + PLD, B + topotecan, paclitaxel, PLD, topotecan) on | 8487 | N |
Model 9 was not retained because of the unsuccessful estimation of standard errors reflecting model over-parametrization.
Abbreviations: AIC, Akaike information criteria; B, bevacizumab; CT, chemotherapy; PLD, pegylated liposomal doxorubicin.