Literature DB >> 31180413

Ultrasensitive and simultaneous determination of RNA modified nucleotides by sheathless interfaced capillary electrophoresis-tandem mass spectrometry.

Yue Yu1, Si-Hao Zhu2, Fang Yuan1, Xiao-Hui Zhang3, Yan-Ye Lu2, Ying-Lin Zhou1, Xin-Xiang Zhang1.   

Abstract

A label-free ultrasensitive determination of eight RNA modified nucleotides simultaneously was first established based on a sheathless capillary electrophoresis-tandem mass spectrometry system. This system performed well using only 500 pg-5 ng practical RNA samples, and a downward trend of most target nucleotides in HCT 116 cells was observed with the increase of nickel concentration.

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Year:  2019        PMID: 31180413     DOI: 10.1039/c9cc03195b

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  4 in total

1.  Bisulfite-free and single-nucleotide resolution sequencing of DNA epigenetic modification of 5-hydroxymethylcytosine using engineered deaminase.

Authors:  Neng-Bin Xie; Min Wang; Tong-Tong Ji; Xia Guo; Jiang-Hui Ding; Bi-Feng Yuan; Yu-Qi Feng
Journal:  Chem Sci       Date:  2022-05-26       Impact factor: 9.969

2.  Data-Independent Acquisition for the Detection of Mononucleoside RNA Modifications by Mass Spectrometry.

Authors:  Kevin A Janssen; Yixuan Xie; Marianne C Kramer; Brian D Gregory; Benjamin A Garcia
Journal:  J Am Soc Mass Spectrom       Date:  2022-03-31       Impact factor: 3.262

3.  Biphasic Liquid Microjunction Extraction for Profiling Neuronal RNA Modifications by Liquid Chromatography-Tandem Mass Spectrometry.

Authors:  Kevin D Clark; Marina C Philip; Yanqi Tan; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2020-08-27       Impact factor: 6.986

Review 4.  Recent developments in the characterization of nucleic acids by liquid chromatography, capillary electrophoresis, ion mobility, and mass spectrometry (2010-2020).

Authors:  Inês C Santos; Jennifer S Brodbelt
Journal:  J Sep Sci       Date:  2020-10-15       Impact factor: 3.645

  4 in total

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