| Literature DB >> 31179125 |
Alexandra Sousa1,2,3, Paulo Canedo4, Manuel Campelo1,2,5, Brenda Moura6, Sérgio Leite7, Márcia Baixia4, Adriana Belo8, Francisco Rocha-Gonçalves1,4, José Carlos Machado4, José Silva-Cardoso1,2,5, Elisabete Martins1,4,5.
Abstract
BACKGROUND: Sudden cardiac death (SCD) risk stratification in dilated cardiomyopathy (DCM) has been based on left ventricular ejection fraction (LVEF), even though SCD may occur with LVEF > 35%. Family history of unexplained SCD, especially in the young, raises concern about potential inheritable risk factors. It remains largely unknown how genetic tests can be integrated into clinical practice, particularly in the selection of implantable cardioverter defibrillator (ICD) candidates. We aimed to assess the diagnostic yield of genetic testing in DCM patients with a class I recommendation for ICD implantation, based on current guidelines.Entities:
Year: 2019 PMID: 31179125 PMCID: PMC6507268 DOI: 10.1155/2019/2743650
Source DB: PubMed Journal: Cardiol Res Pract ISSN: 2090-0597 Impact factor: 1.866
Figure 1Molecular analysis: library and template preparation.
Figure 2Molecular analysis: bioinformatic pipeline.
Patients' characteristics.
| Characteristics | DCM patients ( |
|---|---|
| Gender, | |
| Male | 12 (57) |
| Female | 9 (43) |
|
| |
| Age at diagnosis, years (mean ± SD) | 40 ± 12 |
|
| |
| Age at ICD implantation, years (mean ± SD) | 50 ± 12 |
|
| |
| Familial DCM, | 9 (43) |
| Idiopathic DCM, | 12 (57) |
|
| |
| Family history, | |
| Heart failure-related death | 7 (33) |
| Sudden death | 3 (14) |
|
| |
| Clinical presentation, | |
| Heart failure symptoms | 7 (33) |
| Syncope or arrhythmia | 3 (14) |
| Chest pain | 5 (24) |
| Others | 1 (5) |
|
| |
| NYHA functional class, | |
| I | 6 (28) |
| II | 13 (62) |
| III | 1 (5) |
| IV | 1 (5) |
|
| |
| Previous hospitalizations, | 13 (62) |
| Heart failure-related | 10 (48) |
| Arrhythmic causes | 7 (33) |
| Others† | 1 (5) |
|
| |
| ECG data, | |
| AF/atrial flutter | 4 (19) |
| LBBB | 10 (48) |
| PVC | 5 (24) |
| NSVT | 6 (35) |
|
| |
| Echocardiographic data | |
| LVEDD (mm) (mean ± SD) | 65 ± 7 |
| LVEF (%) (mean ± SD) | 27 ± 9 |
| RV impairment, | 7 (33) |
|
| |
| CMR data, | 7 (33) |
| LVEDV (mL/m2) (mean ± SD) | 144 ± 26 |
| LVEF (%) (mean ± SD) | 28 ± 10 |
| LGE, | 2 (28) |
|
| |
| Medical therapy, | |
| ACEI/ARB | 19 (90) |
| Beta-blockers | 18 (86) |
| MRA | 14 (67) |
| Diuretic | 12 (57) |
| Digoxin | 6 (28) |
| Ivabradine | 2 (10) |
Asymptomatic left ventricular dysfunction diagnosed on medical sportive examination. †Elective hospitalization for atrial flutter ablation. ACEI: angiotensin converting enzyme inhibitor; AF: atrial fibrillation; ARB: angiotensin II receptor blocker; CMR: cardiac magnetic resonance; DCM: dilated cardiomyopathy; ECG: electrocardiogram; ICD: implantable cardioverter defibrillator; LBBB: left bundle branch block; LGE: late gadolinium enhancement; LVEDD: left ventricular end-diastolic diameter; LVEDV: left ventricular end-diastolic volume; LVEF: left ventricular ejection fraction; MRA: mineralocorticoid receptor antagonist; NSVT: nonsustained ventricular tachycardia; NYHA: New York Heart Association; PVC: premature ventricular contraction; RV: right ventricle; SD: standard deviation.
Clinical characteristics of patients with genetic variants.
| Case | Gender | Age | Age at diagnosis | NYHA class | Etiology | ECG-rhythm disturbances | ECG-conduction disturbances | LVEF (%) | LVED (mm) | Affected gene |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Female | 40 | 17 | II | IDCM | SR | — | 38 | 61 |
|
| 2 | Male | 53 | 38 | II | IDCM | SR | LBBB | 38 | 63 |
|
| 3 | Male | 55 | 53 | II | IDCM | SR | LBBB | 39 | 56† |
|
| 4 | Female | 56 | 47 | I | FDCM‡ | SR | — | 37 | 68 |
|
| 5 | Male | 53 | 41 | II | FDCM‡ | SR | — | 33 | 62 |
|
| 6 | Female | 72 | 58 | II | FDCM | AF | LBBB | 20 | 71 |
|
FDCM: familial dilated cardiomyopathy; IDCM: idiopathic dilated cardiomyopathy; LBBB: left bundle branch block; LVED: left ventricular end-diastolic diameter; LVEF: left ventricular ejection fraction; SR: sinus rhythm; serum creatine kinase elevation; †left ventricular hypertrabeculation/noncompaction; ‡sudden death in relatives.
Classification of genetic variants (hg 19).
| Gene | Transcript | NM (NCBI) | Genomic location | Nucleotide change | Amino acid change | MAF ExAC | dbSBP | SIFT [ | Mutation Taster [ | Polyphen-2 [ | ACMG/AMP final classification and criteria |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
| ENST00000288398 | NM_000366.5 | Chr15:63354830 | c.758T > C# | p.Ile253Thr | — | — | Deleterious | Disease causing | Possibly damaging | VUS (PM2, PP3) |
|
| ENST00000367318 | NM_001001430.2 | Chr1:201332477 | c.517C > T | p.Arg173Trp | — | rs727503512 | Deleterious | Disease causing | Probably damaging | Likely pathogenic (PS4, PP3, PP1, PP5, PP4) |
|
| ENST00000355349 | NM_000257.3 | Chr14:23414039 | c.5623G > T# | p.Val1875Phe | — | — | Deleterious | Disease causing | Probably damaging | VUS (PM2, PP3) |
|
| ENST00000357525 | NM_002667.3 | |||||||||
| Case 4 | Chr6:118880145 | c.61C > A | p.Pro21Thr | 0.00005779 | rs397516786 | Tolerated | Disease causing | Probably damaging | VUS (PP3) | ||
| Case 5 | Chr6:118558944 | c.23C > T# | p.Thr8Ile | — | — | Deleterious | Disease causing | Probably damaging | VUS (PM2) | ||
|
| ENST00000545968 | NM_000256.3 | Chr11:47364805 | c.1226 + 6T > C† | — | 0.00006195 | rs397515892 | — | — | — | VUS |
ACMG/AMP: American College of Medical Genetics and Genomics/Association for Molecular Pathology [8]. MAF: minor allele frequency. Evidence for variant classification: PS, pathogenic strong; PM, pathogenic moderate; PP, pathogenic supporting; the numbering within each category does not convey any differences of weight and refer the different criteria: PS4, the prevalence of the variant in affected individuals is significantly increased compared with the prevalence in controls; PP1, cosegregation with disease in multiple affected family members in a gene is definitively known to cause the disease; PP3, multiple lines of computational evidence support a deleterious effect on the gene or gene product; PP4, patient's phenotype or family history is highly specific for a disease with a single genetic etiology; PP5, reputable source recently reports variant as pathogenic, but the evidence is not available to the laboratory to perform an independent evaluation; PM2, the variant is absent from (or below the expected carrier frequency if recessive) a large general population or a control cohort (>1000 individuals), and the population is race-matched to the patient harboring the identified variant. #Novel variant (not present in Exome Aggregation Consortium (ExAC) [16], Exome Sequencing Project (ESP) (http://evs.gs.washington.edu/EVS), 1000 Genomes (1 KG) [17], Single Nucleotide Polymorphism (dbSNP) [18], The Human Gene Mutation Database (HGMD) [19], ClinVar [20], and Leiden Open Variation Database (LOVD)) [21]. †This variant has probably no impact on splicing. VUS: variant of uncertain significance.
Figure 3Pedigree (a) and electrocardiogram (b) of the patient with the p.Pro21Thr phospholamban variant. The electrocardiogram reveals sinus rhythm and a QRS width of 101 ms. Squares: male; circles: female; dark symbol: dilated cardiomyopathy; ±symbols: presence/absence of PLN variant; numbers inside the symbols: current age; SD: sudden death; “?”: inexistent information or availability for clinical/genetic assessment.
Patients' characteristics according to molecular study results.
| Patient characteristics | No variant ( | Variant-positive ( |
|
|---|---|---|---|
| Age at | 40 ± 11 | 42 ± 14 | 0.633 |
| Age at ICD implantation, years (mean ± SD) | 50 ± 12 | 51 ± 13 | 0.872 |
| Male, | 9 (60) | 3 (50) | 1.000 |
| Familial cases, | 6 (40) | 3 (50) | 1.000 |
| Family history, | |||
| Sudden cardiac death | 1 (7) | 2 (33) | 0.184 |
| Previous hospitalizations, | 9 (64) | 4 (67) | 1.000 |
| Heart failure-related | 8 (57) | 2 (33) | 0.628 |
| Arrhythmic causes | 4 (29) | 3 (50) | 0.613 |
| NYHA, | |||
| >I | 10 (67) | 5 (83) | 0.802 |
| ECG data, | |||
| LBBB | 7 (47) | 3 (50) | 1.000 |
| Atrial fibrillation | 3 (20) | 1 (17) | 1.000 |
| NSVT | 4 (36) | 2 (33) | 1.000 |
| PVC | 5 (33) | 0 (0) | 0.262 |
| Echocardiogram data | |||
| LVEDD (mm) (mean ± SD) | 65 ± 7 | 63 ± 6 | 0.503 |
| LVEF (%) (mean ± SD) | 24 ± 8 | 34 ± 7 | 0.024 |
| RV impairment, | 4 (31) | 3 (50) | 0.617 |
ICD: implantable cardioverter defibrillator; LBBB: left bundle branch block; LVEDD: left ventricular end-diastolic diameter; LVEF: left ventricular ejection fraction; NSVT: nonsustained ventricular tachycardia; RV: right ventricle; SD: standard deviation.