Literature DB >> 31167969

Systems pharmacology-based integration of human and mouse data for drug repurposing to treat thoracic aneurysms.

Jens Hansen1, Josephine Galatioto1, Cristina I Caescu1, Pauline Arnaud2,3, Rhodora C Calizo1, Bart Spronck4, Sae-Il Murtada4, Roshan Borkar5, Alan Weinberg6, Evren U Azeloglu1, Maria Bintanel-Morcillo1, James M Gallo5, Jay D Humphrey4, Guillaume Jondeau2,3, Catherine Boileau2,3, Francesco Ramirez1, Ravi Iyengar1.   

Abstract

Marfan syndrome (MFS) is associated with mutations in fibrillin-1 that predispose afflicted individuals to progressive thoracic aortic aneurysm (TAA) leading to dissection and rupture of the vessel wall. Here we combined computational and experimental approaches to identify and test FDA-approved drugs that may slow or even halt aneurysm progression. Computational analyses of transcriptomic data derived from the aortas of MFS patients and MFS mice (Fbn1mgR/mgR mice) predicted that subcellular pathways associated with reduced muscle contractility are key TAA determinants that could be targeted with the GABAB receptor agonist baclofen. Systemic administration of baclofen to Fbn1mgR/mgR mice validated our computational prediction by mitigating arterial disease progression at the cellular and physiological levels. Interestingly, baclofen improved muscle contraction-related subcellular pathways by upregulating a different set of genes than those downregulated in the aorta of vehicle-treated Fbn1mgR/mgR mice. Distinct transcriptomic profiles were also associated with drug-treated MFS and wild-type mice. Thus, systems pharmacology approaches that compare patient- and mouse-derived transcriptomic data for subcellular pathway-based drug repurposing represent an effective strategy to identify potential new treatments of human diseases.

Entities:  

Keywords:  Bioinformatics; Cardiovascular disease; Extracellular matrix; Therapeutics

Year:  2019        PMID: 31167969      PMCID: PMC6629138          DOI: 10.1172/jci.insight.127652

Source DB:  PubMed          Journal:  JCI Insight        ISSN: 2379-3708


  48 in total

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Authors:  Jay O Boyle; Zeynep H Gümüs; Ashutosh Kacker; Vishal L Choksi; Jennifer M Bocker; Xi Kathy Zhou; Rhonda K Yantiss; Duncan B Hughes; Baoheng Du; Benjamin L Judson; Kotha Subbaramaiah; Andrew J Dannenberg
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Journal:  Science       Date:  2006-09-29       Impact factor: 47.728

4.  The revised Ghent nosology for the Marfan syndrome.

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Journal:  J Med Genet       Date:  2010-07       Impact factor: 6.318

5.  Pathogenetic sequence for aneurysm revealed in mice underexpressing fibrillin-1.

Authors:  L Pereira; S Y Lee; B Gayraud; K Andrikopoulos; S D Shapiro; T Bunton; N J Biery; H C Dietz; L Y Sakai; F Ramirez
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6.  Losartan, an AT1 antagonist, prevents aortic aneurysm in a mouse model of Marfan syndrome.

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9.  Noncanonical TGFβ signaling contributes to aortic aneurysm progression in Marfan syndrome mice.

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Journal:  Science       Date:  2011-04-15       Impact factor: 47.728

10.  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Authors:  Cole Trapnell; Brian A Williams; Geo Pertea; Ali Mortazavi; Gordon Kwan; Marijke J van Baren; Steven L Salzberg; Barbara J Wold; Lior Pachter
Journal:  Nat Biotechnol       Date:  2010-05-02       Impact factor: 54.908

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Journal:  Diabetes       Date:  2020-10-16       Impact factor: 9.461

Review 2.  Marfan syndrome.

Authors:  Dianna M Milewicz; Alan C Braverman; Julie De Backer; Shaine A Morris; Catherine Boileau; Irene H Maumenee; Guillaume Jondeau; Arturo Evangelista; Reed E Pyeritz
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3.  Numerical knockouts-In silico assessment of factors predisposing to thoracic aortic aneurysms.

Authors:  M Latorre; J D Humphrey
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4.  Inhibition of HIPK2 Alleviates Thoracic Aortic Disease in Mice With Progressively Severe Marfan Syndrome.

Authors:  Cristina I Caescu; Jens Hansen; Brittany Crockett; Wenzhen Xiao; Pauline Arnaud; Bart Spronck; Alan Weinberg; Takeshi Hashimoto; Sae-Il Murtada; Roshan Borkar; James M Gallo; Guillaume Jondeau; Catherine Boileau; Jay D Humphrey; John Cijiang He; Ravi Iyengar; Francesco Ramirez
Journal:  Arterioscler Thromb Vasc Biol       Date:  2021-07-29       Impact factor: 10.514

  4 in total

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