Literature DB >> 31167843

Real-Time PCR Assay for Differentiation of Typhoidal and Nontyphoidal Salmonella.

Satheesh Nair1, Vineet Patel2,3, Tadgh Hickey2,3, Clare Maguire2, David R Greig2, Winnie Lee2, Gauri Godbole2, Kathie Grant2, Marie Anne Chattaway2.   

Abstract

Rapid and accurate differentiation of Salmonella spp. causing enteric fever from nontyphoidal Salmonella is essential for clinical management of cases, laboratory risk management, and implementation of public health measures. Current methods used for confirmation of identification, including biochemistry and serotyping as well as whole-genome sequencing analyses, take several days. Here we report the development and evaluation of a real-time PCR assay that can be performed directly on crude DNA extracts from bacterial colonies for the rapid identification of typhoidal and nontyphoidal Salmonella. © Crown copyright 2019.

Entities:  

Keywords:  Nontyphoidal salmonellae; Salmonellazzm321990; real-time PCR; typhoidal salmonellae; whole-genome sequencing

Year:  2019        PMID： 31167843      PMCID： PMC6663909          DOI： 10.1128/JCM.00167-19

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  20 in total

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Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

2.  Selective amplification of tyv (rfbE), prt (rfbS), viaB, and fliC genes by multiplex PCR for identification of Salmonella enterica serovars Typhi and Paratyphi A.

Authors:  Kenji Hirose; Ken-Ichiro Itoh; Hiroshi Nakajima; Takayuki Kurazono; Masanori Yamaguchi; Kazuo Moriya; Takayuki Ezaki; Yoshiaki Kawamura; Kazumichi Tamura; Haruo Watanabe
Journal:  J Clin Microbiol       Date:  2002-02       Impact factor: 5.948

3.  Detection of Vi-negative Salmonella enterica serovar typhi in the peripheral blood of patients with typhoid fever in the Faisalabad region of Pakistan.

Authors:  Stephen Baker; Yasra Sarwar; Hafsa Aziz; Asma Haque; Aamir Ali; Gordon Dougan; John Wain; Abdul Haque
Journal:  J Clin Microbiol       Date:  2005-09       Impact factor: 5.948

4.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

5.  Rapid identification of Salmonella enterica subsp. arizonae and S. enterica subsp. diarizonae by real-time polymerase chain reaction.

Authors:  Katie L Hopkins; Tansy M Peters; Andy J Lawson; Robert J Owen
Journal:  Diagn Microbiol Infect Dis       Date:  2009-08       Impact factor: 2.803

6.  PCR method to identify Salmonella enterica serovars Typhi, Paratyphi A, and Paratyphi B among Salmonella Isolates from the blood of patients with clinical enteric fever.

Authors:  Haim Levy; Souleymane Diallo; Sharon M Tennant; Sofie Livio; Samba O Sow; Milagritos Tapia; Patricia I Fields; Matthew Mikoleit; Boubou Tamboura; Karen L Kotloff; Rosanna Lagos; James P Nataro; James E Galen; Myron M Levine
Journal:  J Clin Microbiol       Date:  2008-03-26       Impact factor: 5.948

7.  Salmonella enterica serovar Typhi strains from which SPI7, a 134-kilobase island with genes for Vi exopolysaccharide and other functions, has been deleted.

Authors:  Satheesh Nair; Suneetha Alokam; Sushma Kothapalli; Steffan Porwollik; Emily Proctor; Carmen Choy; Michael McClelland; Shu-Lin Liu; Kenneth E Sanderson
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

Review 8.  Typhoid fever.

Authors:  John Wain; Rene S Hendriksen; Matthew L Mikoleit; Karen H Keddy; R Leon Ochiai
Journal:  Lancet       Date:  2014-10-21       Impact factor: 79.321

9.  The sensitivity of real-time PCR amplification targeting invasive Salmonella serovars in biological specimens.

Authors:  Tran Vu Thieu Nga; Abhilasha Karkey; Sabina Dongol; Hang Nguyen Thuy; Sarah Dunstan; Kathryn Holt; Le Thi Phuong Tu; James I Campbell; Tran Thuy Chau; Nguyen Van Vinh Chau; Amit Arjyal; Samir Koirala; Buddha Basnyat; Christiane Dolecek; Jeremy Farrar; Stephen Baker
Journal:  BMC Infect Dis       Date:  2010-05-21       Impact factor: 3.090

10.  Salmonella paratyphi C: genetic divergence from Salmonella choleraesuis and pathogenic convergence with Salmonella typhi.

Authors:  Wei-Qiao Liu; Ye Feng; Yan Wang; Qing-Hua Zou; Fang Chen; Ji-Tao Guo; Yi-Hong Peng; Yan Jin; Yong-Guo Li; Song-Nian Hu; Randal N Johnston; Gui-Rong Liu; Shu-Lin Liu
Journal:  PLoS One       Date:  2009-02-20       Impact factor: 3.240
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1.  Spatial and Genomic Data to Characterize Endemic Typhoid Transmission.

Authors:  Jillian S Gauld; Franziska Olgemoeller; Eva Heinz; Rose Nkhata; Sithembile Bilima; Alexander M Wailan; Neil Kennedy; Jane Mallewa; Melita A Gordon; Jonathan M Read; Robert S Heyderman; Nicholas R Thomson; Peter J Diggle; Nicholas A Feasey
Journal:  Clin Infect Dis       Date:  2022-06-10       Impact factor: 20.999

2.  Review of Methods Suitable for Environmental Surveillance of Salmonella Typhi and Paratyphi.

Authors:  Graciela Matrajt; Lorraine Lillis; J Scott Meschke
Journal:  Clin Infect Dis       Date:  2020-07-29       Impact factor: 9.079

3.  GD2-specific chimeric antigen receptor-modified T cells for the treatment of refractory and/or recurrent neuroblastoma in pediatric patients.

Authors:  Lihua Yu; Lulu Huang; Danna Lin; Xiaorong Lai; Li Wu; Xu Liao; Jiale Liu; Yinghua Zeng; Lichan Liang; Guanmei Zhang; Bin Wang; Zhu Wu; Shaohua Tao; Yuchen Liu; Cheng Jiao; Lung-Ji Chang; Lihua Yang
Journal:  J Cancer Res Clin Oncol       Date:  2021-11-01       Impact factor: 4.322

Review 4.  Reviving the "Moore Swab": a Classic Environmental Surveillance Tool Involving Filtration of Flowing Surface Water and Sewage Water To Recover Typhoidal Salmonella Bacteria.

Authors:  Michael J Sikorski; Myron M Levine
Journal:  Appl Environ Microbiol       Date:  2020-06-17       Impact factor: 4.792
  4 in total

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