Literature DB >> 31165261

Copan microFLOQ® Direct Swab collection of bloodstains, saliva, and semen on cotton cloth.

Allison J Sherier1,2, Rachel E Kieser3,4, Nicole M M Novroski3,4,5, Frank R Wendt3,4,6, Jonathan L King3, August E Woerner3,4, Angie Ambers3,4, Paolo Garofano7,8, Bruce Budowle3,4.   

Abstract

The microFLOQ® Direct Swab was tested by sampling diluted blood, semen, and saliva stains deposited on cotton cloth. DNA typing was performed using the PowerPlex® Fusion 6C System by direct PCR or a modified direct PCR. Direct PCR of swabs sampled the center of a stain, compared to their respective edge samplings, and had higher profile completeness and total relative fluorescent units (RFU) for all dilutions of blood and semen stains tested. The modified direct PCR used template DNA eluted from the swab head using the Casework Direct Kit, Custom and washes either contained 1-thioglycerol (TG) additive or no TG. Modified direct PCR had mixed results for blood, saliva, and semen stains, with semen stains showing significant differences in profile completeness (5% and 1%) and total RFU (neat, 5% and 1%) with the addition of TG to the Casework Direct Reagent. No significant difference was seen in any dilution of blood or saliva stains processed with the modified direct PCR, but profile completeness and total RFU were improved overall compared to stains swabbed with cotton swabs or 4N6FLOQSwabs™. This study supports the hypothesis that the microFLOQ® Direct Swab is able to collect minute amounts of DNA from cotton cloth and may be considered as an alternate pre-screening methodology in forensic biology casework.

Entities:  

Keywords:  Casework Direct Kit, Custom; Direct PCR; MicroFLOQ® Direct Swab; PowerPlex® Fusion 6C; PowerQuant® System; Stains

Mesh:

Substances:

Year:  2019        PMID: 31165261     DOI: 10.1007/s00414-019-02081-6

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  16 in total

1.  Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR.

Authors:  Karen L Mumy; Robert H Findlay
Journal:  J Microbiol Methods       Date:  2004-05       Impact factor: 2.363

2.  A comparison of DNA collection and retrieval from two swab types (cotton and nylon flocked swab) when processed using three QIAGEN extraction methods.

Authors:  Robert J Brownlow; Kathryn E Dagnall; Carole E Ames
Journal:  J Forensic Sci       Date:  2011-12-28       Impact factor: 1.832

3.  Harnessing the power of the human microbiome.

Authors:  Martin J Blaser
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-01       Impact factor: 11.205

4.  Direct PCR Improves the Recovery of DNA from Various Substrates.

Authors:  Jennifer E L Templeton; Duncan Taylor; Oliva Handt; Pawel Skuza; Adrian Linacre
Journal:  J Forensic Sci       Date:  2015-08-12       Impact factor: 1.832

5.  Comparison of flocked and rayon swabs for collection of respiratory epithelial cells from uninfected volunteers and symptomatic patients.

Authors:  Peter Daley; Santina Castriciano; Max Chernesky; Marek Smieja
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

6.  Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments.

Authors:  Jesse Dabney; Michael Knapp; Isabelle Glocke; Marie-Theres Gansauge; Antje Weihmann; Birgit Nickel; Cristina Valdiosera; Nuria García; Svante Pääbo; Juan-Luis Arsuaga; Matthias Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

7.  Assessment and mitigation of DNA loss utilizing centrifugal filtration devices.

Authors:  Ashley E Doran; David R Foran
Journal:  Forensic Sci Int Genet       Date:  2014-08-09       Impact factor: 4.882

8.  Swabs as DNA collection devices for sampling different biological materials from different substrates.

Authors:  Timothy J Verdon; Robert J Mitchell; Roland A H van Oorschot
Journal:  J Forensic Sci       Date:  2014-02-06       Impact factor: 1.832

9.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.

Authors:  Maria G Dominguez-Bello; Elizabeth K Costello; Monica Contreras; Magda Magris; Glida Hidalgo; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

10.  Bacterial community variation in human body habitats across space and time.

Authors:  Elizabeth K Costello; Christian L Lauber; Micah Hamady; Noah Fierer; Jeffrey I Gordon; Rob Knight
Journal:  Science       Date:  2009-11-05       Impact factor: 47.728

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  2 in total

1.  Determination of human identity from Anopheles stephensi mosquito blood meals using direct amplification and massively parallel sequencing.

Authors:  Shayna L Gray; Teresa M Tiedge; Joann M Butkus; Tyler J Earp; Scott E Lindner; Reena Roy
Journal:  Forensic Sci Int Genet       Date:  2020-07-11       Impact factor: 4.882

Review 2.  DNA Transfer in Forensic Science: Recent Progress towards Meeting Challenges.

Authors:  Roland A H van Oorschot; Georgina E Meakin; Bas Kokshoorn; Mariya Goray; Bianca Szkuta
Journal:  Genes (Basel)       Date:  2021-11-07       Impact factor: 4.096

  2 in total

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