Literature DB >> 31164001

Preserving genome integrity and function: the DNA damage response and histone modifications.

Jae Jin Kim1, Seo Yun Lee1, Kyle M Miller1.   

Abstract

Modulation of chromatin templates in response to cellular cues, including DNA damage, relies heavily on the post-translation modification of histones. Numerous types of histone modifications including phosphorylation, methylation, acetylation, and ubiquitylation occur on specific histone residues in response to DNA damage. These histone marks regulate both the structure and function of chromatin, allowing for the transition between chromatin states that function in undamaged condition to those that occur in the presence of DNA damage. Histone modifications play well-recognized roles in sensing, processing, and repairing damaged DNA to ensure the integrity of genetic information and cellular homeostasis. This review highlights our current understanding of histone modifications as they relate to DNA damage responses (DDRs) and their involvement in genome maintenance, including the potential targeting of histone modification regulators in cancer, a disease that exhibits both epigenetic dysregulation and intrinsic DNA damage.

Entities:  

Keywords:  Chromatin; DNA damage; DNA double-strand break repair; genome integrity; histones; modifications; transcription

Mesh:

Substances:

Year:  2019        PMID: 31164001      PMCID: PMC6715524          DOI: 10.1080/10409238.2019.1620676

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  305 in total

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Review 3.  Chromatin modifications and their function.

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Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

4.  DNA double-strand breaks promote methylation of histone H3 on lysine 9 and transient formation of repressive chromatin.

Authors:  Marina K Ayrapetov; Ozge Gursoy-Yuzugullu; Chang Xu; Ye Xu; Brendan D Price
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5.  Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions.

Authors:  Thomas Kusch; Laurence Florens; W Hayes Macdonald; Selene K Swanson; Robert L Glaser; John R Yates; Susan M Abmayr; Michael P Washburn; Jerry L Workman
Journal:  Science       Date:  2004-11-04       Impact factor: 47.728

Review 6.  The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway.

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8.  High-resolution profiling of gammaH2AX around DNA double strand breaks in the mammalian genome.

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Authors:  Ruifeng Guo; Jie Chen; David L Mitchell; David G Johnson
Journal:  Nucleic Acids Res       Date:  2010-10-23       Impact factor: 16.971

10.  Serine is the major residue for ADP-ribosylation upon DNA damage.

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  24 in total

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2.  Emerging roles of RNA modifications in genome integrity.

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Journal:  Brief Funct Genomics       Date:  2021-03-27       Impact factor: 4.241

3.  Deubiquitinase OTUD6A promotes breast cancer progression by increasing TopBP1 stability and rendering tumor cells resistant to DNA-damaging therapy.

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5.  Quantitative Analysis of the Protein Methylome Reveals PARP1 Methylation is involved in DNA Damage Response.

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6.  PCAF-Mediated Histone Acetylation Promotes Replication Fork Degradation by MRE11 and EXO1 in BRCA-Deficient Cells.

Authors:  Jae Jin Kim; Seo Yun Lee; Ji-Hye Choi; Hyun Goo Woo; Blerta Xhemalce; Kyle M Miller
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7.  Poly(ADP-ribose) binding and macroH2A mediate recruitment and functions of KDM5A at DNA lesions.

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