Literature DB >> 31163895

High-speed collagen fiber modeling and orientation quantification for optical coherence tomography imaging.

James P McLean, Yu Gan, Theresa H Lye, Dovina Qu, Helen H Lu, Christine P Hendon.   

Abstract

Quantifying collagen fiber architecture has clinical and scientific relevance across a variety of tissue types and adds functionality to otherwise largely qualitative imaging modalities. Optical coherence tomography (OCT) is uniquely suited for this task due to its ability to capture the collagen microstructure over larger fields of view than traditional microscopy. Existing image processing techniques for quantifying fiber architecture, while accurate and effective, are very slow for processing large datasets and tend to lack structural specificity. We describe here a computationally efficient method for quantifying and visualizing collagen fiber organization. The algorithm is demonstrated on swine atria, bovine anterior cruciate ligament, and human cervical tissue samples. Additionally, we show an improved performance for images with crimped fiber textures and low signal to noise when compared to similar methods.

Entities:  

Year:  2019        PMID: 31163895      PMCID: PMC6825605          DOI: 10.1364/OE.27.014457

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  33 in total

1.  Quantification of fiber orientation in the canine atrial pacemaker complex using optical coherence tomography.

Authors:  Christina M Ambrosi; Vadim V Fedorov; Richard B Schuessler; Andrew M Rollins; Igor R Efimov
Journal:  J Biomed Opt       Date:  2012-07       Impact factor: 3.170

2.  Analyzing three-dimensional ultrastructure of human cervical tissue using optical coherence tomography.

Authors:  Yu Gan; Wang Yao; Kristin M Myers; Joy Y Vink; Ronald J Wapner; Christine P Hendon
Journal:  Biomed Opt Express       Date:  2015-03-03       Impact factor: 3.732

3.  Volumetric non-local-means based speckle reduction for optical coherence tomography.

Authors:  Carlos Cuartas-Vélez; René Restrepo; Brett E Bouma; Néstor Uribe-Patarroyo
Journal:  Biomed Opt Express       Date:  2018-06-26       Impact factor: 3.732

4.  A continuous fiber distribution material model for human cervical tissue.

Authors:  Kristin M Myers; Christine P Hendon; Yu Gan; Wang Yao; Kyoko Yoshida; Michael Fernandez; Joy Vink; Ronald J Wapner
Journal:  J Biomech       Date:  2015-03-14       Impact factor: 2.712

5.  Rapid quantification of pixel-wise fiber orientation data in micrographs.

Authors:  Kyle P Quinn; Irene Georgakoudi
Journal:  J Biomed Opt       Date:  2013-04       Impact factor: 3.170

6.  Modeling the effect of collagen fibril alignment on ligament mechanical behavior.

Authors:  Christina J Stender; Evan Rust; Peter T Martin; Erica E Neumann; Raquel J Brown; Trevor J Lujan
Journal:  Biomech Model Mechanobiol       Date:  2017-11-24

7.  Quantization of collagen organization in the stroma with a new order coefficient.

Authors:  James A Germann; Eduardo Martinez-Enriquez; Susana Marcos
Journal:  Biomed Opt Express       Date:  2017-12-08       Impact factor: 3.732

8.  Estimating fiber orientation distribution from diffusion MRI with spherical needlets.

Authors:  Hao Yan; Owen Carmichael; Debashis Paul; Jie Peng
Journal:  Med Image Anal       Date:  2018-02-08       Impact factor: 8.545

9.  Optical coherence tractography using intrinsic contrast.

Authors:  Craig J Goergen; Harsha Radhakrishnan; Sava Sakadžić; Emiri T Mandeville; Eng H Lo; David E Sosnovik; Vivek J Srinivasan
Journal:  Opt Lett       Date:  2012-09-15       Impact factor: 3.776

10.  Collagen Fiber Orientation and Dispersion in the Upper Cervix of Non-Pregnant and Pregnant Women.

Authors:  Wang Yao; Yu Gan; Kristin M Myers; Joy Y Vink; Ronald J Wapner; Christine P Hendon
Journal:  PLoS One       Date:  2016-11-29       Impact factor: 3.240

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  5 in total

Review 1.  High-resolution 3D tractography of fibrous tissue based on polarization-sensitive optical coherence tomography.

Authors:  Gang Yao; Dongsheng Duan
Journal:  Exp Biol Med (Maywood)       Date:  2019-12-08

2.  Three-dimensional collagen fiber mapping and tractography of human uterine tissue using OCT.

Authors:  James P McLean; Shuyang Fang; George Gallos; Kristin M Myers; Christine P Hendon
Journal:  Biomed Opt Express       Date:  2020-09-11       Impact factor: 3.732

Review 3.  Nondestructive testing of native and tissue-engineered medical products: adding numbers to pictures.

Authors:  Nathan J Castro; Greta Babakhanova; Jerry Hu; K A Athanasiou
Journal:  Trends Biotechnol       Date:  2021-07-24       Impact factor: 19.536

4.  Predicting the Effect of Localized ACL Damage on Neighbor Ligament Mechanics via Finite Element Modeling.

Authors:  Alexander Knapp; Lakiesha N Williams
Journal:  Bioengineering (Basel)       Date:  2022-01-28

5.  Full-Range Optical Imaging of Planar Collagen Fiber Orientation Using Polarized Light Microscopy.

Authors:  Michaela Turčanová; Martin Hrtoň; Petr Dvořák; Kamil Novák; Markéta Hermanová; Zdeněk Bednařík; Stanislav Polzer; Jiří Burša
Journal:  Biomed Res Int       Date:  2021-11-28       Impact factor: 3.411

  5 in total

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