Literature DB >> 31154975

Parallelism and convergence in post-domestication adaptation in cereal grasses.

M R Woodhouse1, M B Hufford1.   

Abstract

The selection of desirable traits in crops during domestication has been well studied. Many crops share a suite of modified phenotypic characteristics collectively known as the domestication syndrome. In this sense, crops have convergently evolved. Previous work has demonstrated that, at least in some instances, convergence for domestication traits has been achieved through parallel molecular means. However, both demography and selection during domestication may have placed limits on evolutionary potential and reduced opportunities for convergent adaptation during post-domestication migration to new environments. Here we review current knowledge regarding trait convergence in the cereal grasses and consider whether the complexity and dynamism of cereal genomes (e.g., transposable elements, polyploidy, genome size) helped these species overcome potential limitations owing to domestication and achieve broad subsequent adaptation, in many cases through parallel means. This article is part of the theme issue 'Convergent evolution in the genomics era: new insights and directions'.

Entities:  

Keywords:  adaptation; convergence; domestication; evolution; plants

Mesh:

Year:  2019        PMID: 31154975      PMCID: PMC6560265          DOI: 10.1098/rstb.2018.0245

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  105 in total

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Authors:  Weiya Xue; Yongzhong Xing; Xiaoyu Weng; Yu Zhao; Weijiang Tang; Lei Wang; Hongju Zhou; Sibin Yu; Caiguo Xu; Xianghua Li; Qifa Zhang
Journal:  Nat Genet       Date:  2008-05-04       Impact factor: 38.330

2.  Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering.

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Journal:  Plant Cell Physiol       Date:  2012-03-06       Impact factor: 4.927

3.  Grinding up wheat: a massive loss of nucleotide diversity since domestication.

Authors:  A Haudry; A Cenci; C Ravel; T Bataillon; D Brunel; C Poncet; I Hochu; S Poirier; S Santoni; S Glémin; J David
Journal:  Mol Biol Evol       Date:  2007-04-18       Impact factor: 16.240

4.  Mutation at the circadian clock gene EARLY MATURITY 8 adapts domesticated barley (Hordeum vulgare) to short growing seasons.

Authors:  Sebastien Faure; Adrian S Turner; Damian Gruszka; Vangelis Christodoulou; Seth J Davis; Maria von Korff; David A Laurie
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-07       Impact factor: 11.205

5.  Parallel domestication of the Shattering1 genes in cereals.

Authors:  Zhongwei Lin; Xianran Li; Laura M Shannon; Cheng-Ting Yeh; Ming L Wang; Guihua Bai; Zhao Peng; Jiarui Li; Harold N Trick; Thomas E Clemente; John Doebley; Patrick S Schnable; Mitchell R Tuinstra; Tesfaye T Tesso; Frank White; Jianming Yu
Journal:  Nat Genet       Date:  2012-05-13       Impact factor: 38.330

6.  Cloning and characterization of a cDNA encoding a mRNA rapidly-induced by ABA in barley aleurone layers.

Authors:  B Hong; S J Uknes; T H Ho
Journal:  Plant Mol Biol       Date:  1988-07       Impact factor: 4.076

7.  Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley.

Authors:  Jordi Comadran; Benjamin Kilian; Joanne Russell; Luke Ramsay; Nils Stein; Martin Ganal; Paul Shaw; Micha Bayer; William Thomas; David Marshall; Pete Hedley; Alessandro Tondelli; Nicola Pecchioni; Enrico Francia; Viktor Korzun; Alexander Walther; Robbie Waugh
Journal:  Nat Genet       Date:  2012-11-18       Impact factor: 38.330

8.  Evolutionary origins of Brassicaceae specific genes in Arabidopsis thaliana.

Authors:  Mark Ta Donoghue; Channa Keshavaiah; Sandesh H Swamidatta; Charles Spillane
Journal:  BMC Evol Biol       Date:  2011-02-18       Impact factor: 3.260

9.  The impact of widespread regulatory neofunctionalization on homeolog gene evolution following whole-genome duplication in maize.

Authors:  Thomas E Hughes; Jane A Langdale; Steven Kelly
Journal:  Genome Res       Date:  2014-04-30       Impact factor: 9.043

10.  ZmCCT9 enhances maize adaptation to higher latitudes.

Authors:  Cheng Huang; Huayue Sun; Dingyi Xu; Qiuyue Chen; Yameng Liang; Xufeng Wang; Guanghui Xu; Jinge Tian; Chenglong Wang; Dan Li; Lishuan Wu; Xiaohong Yang; Weiwei Jin; John F Doebley; Feng Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-26       Impact factor: 11.205

View more
  5 in total

1.  Convergent evolution in the genomics era: new insights and directions.

Authors:  Timothy B Sackton; Nathan Clark
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-06-03       Impact factor: 6.237

Review 2.  A Reappraisal of Polyploidy Events in Grasses (Poaceae) in a Rapidly Changing World.

Authors:  Acga Cheng; Noraikim Mohd Hanafiah; Jennifer Ann Harikrishna; Lim Phaik Eem; Niranjan Baisakh; Muhamad Shakirin Mispan
Journal:  Biology (Basel)       Date:  2022-04-21

3.  New Food Crop Domestication in the Age of Gene Editing: Genetic, Agronomic and Cultural Change Remain Co-evolutionarily Entangled.

Authors:  David L Van Tassel; Omar Tesdell; Brandon Schlautman; Matthew J Rubin; Lee R DeHaan; Timothy E Crews; Aubrey Streit Krug
Journal:  Front Plant Sci       Date:  2020-06-11       Impact factor: 5.753

4.  Comparative Genetic Analysis of Durum Wheat Landraces and Cultivars Widespread in Tunisia.

Authors:  Monica Marilena Miazzi; Elyes Babay; Pasquale De Vita; Cinzia Montemurro; Ramzi Chaabane; Francesca Taranto; Giacomo Mangini
Journal:  Front Plant Sci       Date:  2022-07-13       Impact factor: 6.627

Review 5.  Genomic Convergence in the Adaptation to Extreme Environments.

Authors:  Shaohua Xu; Jiayan Wang; Zixiao Guo; Ziwen He; Suhua Shi
Journal:  Plant Commun       Date:  2020-10-29
  5 in total

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