Literature DB >> 31148254

Water removal in MR spectroscopic imaging with L2 regularization.

Liangjie Lin1,2, Michal Považan1, Adam Berrington1, Zhong Chen2, Peter B Barker1,3.   

Abstract

PURPOSE: An L2-regularization based postprocessing method is proposed and tested for removal of residual or unsuppressed water signals in proton MR spectroscopic imaging (MRSI) data recorded from the human brain at 3T.
METHODS: Water signals are removed by implementation of the L2 regularization using a synthesized water-basis matrix that is orthogonal to metabolite signals of interest in the spectral dimension. Simulated spectra with variable water amplitude and in vivo brain MRSI datasets were used to demonstrate the proposed method. Results were compared with two commonly-used postprocessing methods for removing water signals.
RESULTS: The L2 method yielded metabolite signals that were close to true values for the simulated spectra. Residual/unsuppressed water signals in human brain short- and long-echo time MRSI datasets were efficiently removed by the proposed method allowing good quality metabolite maps to be reconstructed with minimized contamination from water signals. Significant differences of the creatine signal were observed between brain long-echo time MRSI without and with water saturation, attributable to the previously described magnetization transfer effect.
CONCLUSIONS: With usage of a synthesized water matrix generated based on reasonable prior knowledge about water and metabolite resonances, the L2 method is shown to be an effective way to remove water signals from MRSI of the human brain.
© 2019 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  L2 regularization; MR spectroscopic imaging; metabolite map; water suppression

Mesh:

Substances:

Year:  2019        PMID: 31148254      PMCID: PMC6626566          DOI: 10.1002/mrm.27824

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  38 in total

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Authors:  T Sundin; L Vanhamme; P Van Hecke; I Dologlou; S Van Huffel
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2.  Magnetization transfer attenuation of creatine resonances in localized proton MRS of human brain in vivo.

Authors:  G Helms; J Frahm
Journal:  NMR Biomed       Date:  1999-12       Impact factor: 4.044

3.  The filtering approach to solvent peak suppression in MRS: a critical review.

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4.  Comparison of inversion recovery preparation schemes for lipid suppression in 1H MRSI of human brain.

Authors:  Andreas Ebel; Varanavasi Govindaraju; Andrew A Maudsley
Journal:  Magn Reson Med       Date:  2003-05       Impact factor: 4.668

5.  Truncation artifact reduction in spectroscopic imaging using a dual-density spiral k-space trajectory.

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6.  Lipid suppression in CSI with spatial priors and highly undersampled peripheral k-space.

Authors:  Berkin Bilgic; Borjan Gagoski; Trina Kok; Elfar Adalsteinsson
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7.  In vivo 1H NMR spectroscopy of rat brain at 1 ms echo time.

Authors:  I Tkác; Z Starcuk; I Y Choi; R Gruetter
Journal:  Magn Reson Med       Date:  1999-04       Impact factor: 4.668

8.  Tensor-Based Method for Residual Water Suppression in 1H Magnetic Resonance Spectroscopic Imaging.

Authors:  Bharath Halandur Nagaraja; Otto Debals; Diana M Sima; Uwe Himmelreich; Lieven De Lathauwer; Sabine Van Huffel
Journal:  IEEE Trans Biomed Eng       Date:  2018-07-05       Impact factor: 4.538

9.  Magnetization transfer effect on human brain metabolites and macromolecules.

Authors:  Mary A McLean; Robert J Simister; Gareth J Barker; John S Duncan
Journal:  Magn Reson Med       Date:  2005-11       Impact factor: 4.668

Review 10.  Clinical proton MR spectroscopy in central nervous system disorders.

Authors:  Gülin Oz; Jeffry R Alger; Peter B Barker; Robert Bartha; Alberto Bizzi; Chris Boesch; Patrick J Bolan; Kevin M Brindle; Cristina Cudalbu; Alp Dinçer; Ulrike Dydak; Uzay E Emir; Jens Frahm; Ramón Gilberto González; Stephan Gruber; Rolf Gruetter; Rakesh K Gupta; Arend Heerschap; Anke Henning; Hoby P Hetherington; Franklyn A Howe; Petra S Hüppi; Ralph E Hurd; Kantarci Kantarci; Dennis W J Klomp; Roland Kreis; Marijn J Kruiskamp; Martin O Leach; Alexander P Lin; Peter R Luijten; Malgorzata Marjańska; Andrew A Maudsley; Dieter J Meyerhoff; Carolyn E Mountford; Sarah J Nelson; M Necmettin Pamir; Jullie W Pan; Andrew C Peet; Harish Poptani; Stefan Posse; Petra J W Pouwels; Eva-Maria Ratai; Brian D Ross; Tom W Scheenen; Christian Schuster; Ian C P Smith; Brian J Soher; Ivan Tkáč; Daniel B Vigneron; Risto A Kauppinen
Journal:  Radiology       Date:  2014-03       Impact factor: 11.105

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  2 in total

1.  Magnetic resonance spectroscopic imaging of downfield proton resonances in the human brain at 3 T.

Authors:  Michal Považan; Michael Schär; Joseph Gillen; Peter B Barker
Journal:  Magn Reson Med       Date:  2021-12-31       Impact factor: 4.668

2.  Accelerated J-resolved 1 H-MRSI with limited and sparse sampling of ( k , t 1 , t 2 -space.

Authors:  Lihong Tang; Yibo Zhao; Yudu Li; Rong Guo; Bryan Clifford; Georges El Fakhri; Chao Ma; Zhi-Pei Liang; Jie Luo
Journal:  Magn Reson Med       Date:  2020-07-29       Impact factor: 4.668

  2 in total

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