Literature DB >> 31147520

A key metabolic gene for recurrent freshwater colonization and radiation in fishes.

Asano Ishikawa1,2, Naoki Kabeya3,4, Koki Ikeya5, Ryo Kakioka1, Jennifer N Cech6, Naoki Osada7, Miguel C Leal8, Jun Inoue9, Manabu Kume1, Atsushi Toyoda10, Ayumi Tezuka11, Atsushi J Nagano11, Yo Y Yamasaki1, Yuto Suzuki12, Tomoyuki Kokita12, Hiroshi Takahashi13, Kay Lucek8,14, David Marques8,14, Yusuke Takehana15, Kiyoshi Naruse15, Seiichi Mori16, Oscar Monroig17, Nemiah Ladd18,19, Carsten J Schubert18, Blake Matthews8,20, Catherine L Peichel6,14, Ole Seehausen8,14, Goro Yoshizaki3, Jun Kitano21,2.   

Abstract

Colonization of new ecological niches has triggered large adaptive radiations. Although some lineages have made use of such opportunities, not all do so. The factors causing this variation among lineages are largely unknown. Here, we show that deficiency in docosahexaenoic acid (DHA), an essential ω-3 fatty acid, can constrain freshwater colonization by marine fishes. Our genomic analyses revealed multiple independent duplications of the fatty acid desaturase gene Fads2 in stickleback lineages that subsequently colonized and radiated in freshwater habitats, but not in close relatives that failed to colonize. Transgenic manipulation of Fads2 in marine stickleback increased their ability to synthesize DHA and survive on DHA-deficient diets. Multiple freshwater ray-finned fishes also show a convergent increase in Fads2 copies, indicating its key role in freshwater colonization.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Year:  2019        PMID: 31147520     DOI: 10.1126/science.aau5656

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  29 in total

1.  Degradation of the Repetitive Genomic Landscape in a Close Relative of Caenorhabditis elegans.

Authors:  Gavin C Woodruff; Anastasia A Teterina
Journal:  Mol Biol Evol       Date:  2020-09-01       Impact factor: 16.240

2.  Genome-wide patterns of divergence and introgression after secondary contact between Pungitius sticklebacks.

Authors:  Yo Y Yamasaki; Ryo Kakioka; Hiroshi Takahashi; Atsushi Toyoda; Atsushi J Nagano; Yoshiyasu Machida; Peter R Møller; Jun Kitano
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-13       Impact factor: 6.237

3.  Copy number variation of a fatty acid desaturase gene Fads2 associated with ecological divergence in freshwater stickleback populations.

Authors:  Asano Ishikawa; Yoel E Stuart; Daniel I Bolnick; Jun Kitano
Journal:  Biol Lett       Date:  2021-08-25       Impact factor: 3.812

4.  Convergent copy number increase of genes associated with freshwater colonization in fishes.

Authors:  Asano Ishikawa; Shun Yamanouchi; Wataru Iwasaki; Jun Kitano
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-05-30       Impact factor: 6.671

5.  Lack of ∆5 Desaturase Activity Impairs EPA and DHA Synthesis in Fish Cells from Red Sea Bream and Japanese Flounder.

Authors:  Hayato Nyunoya; Tatsuki Noda; You Kawamoto; Yasuhiro Hayashi; Yohei Ishibashi; Makoto Ito; Nozomu Okino
Journal:  Mar Biotechnol (NY)       Date:  2021-06-26       Impact factor: 3.619

6.  Fatty acid bioconversion in harpacticoid copepods in a changing environment: a transcriptomic approach.

Authors:  Jens Boyen; Patrick Fink; Christoph Mensens; Pascal I Hablützel; Marleen De Troch
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-06-15       Impact factor: 6.237

7.  Fatty acid accumulation in feeding types of a natural freshwater fish population.

Authors:  Kristin Scharnweber; Fernando Chaguaceda; Peter Eklöv
Journal:  Oecologia       Date:  2021-04-25       Impact factor: 3.225

8.  Sp1 is Involved in Vertebrate LC-PUFA Biosynthesis by Upregulating the Expression of Liver Desaturase and Elongase Genes.

Authors:  Yuanyou Li; Jianhong Zhao; Yewei Dong; Ziyan Yin; Yang Li; Yang Liu; Cuihong You; Óscar Monroig; Douglas R Tocher; Shuqi Wang
Journal:  Int J Mol Sci       Date:  2019-10-12       Impact factor: 5.923

9.  Quantitative Lipidomics and Spatial MS-Imaging Uncovered Neurological and Systemic Lipid Metabolic Pathways Underlying Troglomorphic Adaptations in Cave-Dwelling Fish.

Authors:  Sin Man Lam; Jie Li; Huan Sun; Weining Mao; Zongmin Lu; Qingshuo Zhao; Chao Han; Xia Gong; Binhua Jiang; Gek Huey Chua; Zhenwen Zhao; Fanwei Meng; Guanghou Shui
Journal:  Mol Biol Evol       Date:  2022-04-10       Impact factor: 8.800

10.  The role of copy-number variation in the reinforcement of sexual isolation between the two European subspecies of the house mouse.

Authors:  Henry L North; Pierre Caminade; Dany Severac; Khalid Belkhir; Carole M Smadja
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-13       Impact factor: 6.237

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