Literature DB >> 31147353

Deep Learning-Based Automatic Segmentation of Lumbosacral Nerves on CT for Spinal Intervention: A Translational Study.

G Fan1,2,3, H Liu4, Z Wu5, Y Li6, C Feng7,4, D Wang7,4, J Luo3,8, W M Wells3, S He1,4.   

Abstract

BACKGROUND AND
PURPOSE: 3D reconstruction of a targeted area ("safe" triangle and Kambin triangle) may benefit the viability assessment of transforaminal epidural steroid injection, especially at the L5/S1 level. However, manual segmentation of lumbosacral nerves for 3D reconstruction is time-consuming. The aim of this study was to investigate the feasibility of deep learning-based segmentation of lumbosacral nerves on CT and the reconstruction of the safe triangle and Kambin triangle.
MATERIALS AND METHODS: A total of 50 cases of spinal CT were manually labeled for lumbosacral nerves and bones using Slicer 4.8. The ratio of training/validation/testing was 32:8:10. A 3D U-Net was adopted to build the model SPINECT for automatic segmentations of lumbosacral structures. The Dice score, pixel accuracy, and Intersection over Union were computed to assess the segmentation performance of SPINECT. The areas of Kambin and safe triangles were measured to validate the 3D reconstruction.
RESULTS: The results revealed successful segmentation of lumbosacral bone and nerve on CT. The average pixel accuracy for bone was 0.940, and for nerve, 0.918. The average Intersection over Union for bone was 0.897 and for nerve, 0.827. The Dice score for bone was 0.945, and for nerve, it was 0.905. There were no significant differences in the quantified Kambin triangle or safe triangle between manually segmented images and automatically segmented images (P > .05).
CONCLUSIONS: Deep learning-based automatic segmentation of lumbosacral structures (nerves and bone) on routine CT is feasible, and SPINECT-based 3D reconstruction of safe and Kambin triangles is also validated.
© 2019 by American Journal of Neuroradiology.

Entities:  

Year:  2019        PMID: 31147353      PMCID: PMC6746413          DOI: 10.3174/ajnr.A6070

Source DB:  PubMed          Journal:  AJNR Am J Neuroradiol        ISSN: 0195-6108            Impact factor:   3.825


  33 in total

Review 1.  Root cause analysis of paraplegia following transforaminal epidural steroid injections: the 'unsafe' triangle.

Authors:  Scott E Glaser; Rinoo V Shah
Journal:  Pain Physician       Date:  2010 May-Jun       Impact factor: 4.965

2.  3D Slicer as an image computing platform for the Quantitative Imaging Network.

Authors:  Andriy Fedorov; Reinhard Beichel; Jayashree Kalpathy-Cramer; Julien Finet; Jean-Christophe Fillion-Robin; Sonia Pujol; Christian Bauer; Dominique Jennings; Fiona Fennessy; Milan Sonka; John Buatti; Stephen Aylward; James V Miller; Steve Pieper; Ron Kikinis
Journal:  Magn Reson Imaging       Date:  2012-07-06       Impact factor: 2.546

3.  Large Scale Image Segmentation with Structured Loss Based Deep Learning for Connectome Reconstruction.

Authors:  Jan Funke; Fabian Tschopp; William Grisaitis; Arlo Sheridan; Chandan Singh; Stephan Saalfeld; Srinivas C Turaga
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2018-05-24       Impact factor: 6.226

Review 4.  The Lumbar Neural Foramen and Transforaminal Epidural Steroid Injections: An Anatomic Review With Key Safety Considerations in Planning the Percutaneous Approach.

Authors:  Jacob C Mandell; Gregory J Czuczman; Glenn C Gaviola; Varand Ghazikhanian; Charles H Cho
Journal:  AJR Am J Roentgenol       Date:  2017-05-15       Impact factor: 3.959

5.  The Safety of CT-Guided Epidural Steroid Injections in an Older Patient Cohort.

Authors:  Andrew J Fenster; Kevin Fernandes; Alan L Brook; Todd Miller
Journal:  Pain Physician       Date:  2016 Nov-Dec       Impact factor: 4.965

Review 6.  Interventional spine procedures for management of chronic low back pain-a primer.

Authors:  Jason D Iannuccilli; Ethan A Prince; Gregory M Soares
Journal:  Semin Intervent Radiol       Date:  2013-09       Impact factor: 1.513

7.  Automated Pathogenesis-Based Diagnosis of Lumbar Neural Foraminal Stenosis via Deep Multiscale Multitask Learning.

Authors:  Zhongyi Han; Benzheng Wei; Stephanie Leung; Ilanit Ben Nachum; David Laidley; Shuo Li
Journal:  Neuroinformatics       Date:  2018-10

8.  Optimal angle of needle insertion for fluoroscopy-guided transforaminal epidural injection of L5.

Authors:  In-Hoo Ra; Woo-Kie Min
Journal:  Pain Pract       Date:  2014-04-01       Impact factor: 3.183

Review 9.  Epidural steroids for spinal pain and radiculopathy: a narrative, evidence-based review.

Authors:  Indy Wilkinson; Steven P Cohen
Journal:  Curr Opin Anaesthesiol       Date:  2013-10       Impact factor: 2.706

Review 10.  Diffusion tensor imaging studies of cervical spondylotic myelopathy: a systemic review and meta-analysis.

Authors:  Xiaofei Guan; Guoxin Fan; Xinbo Wu; Guangfei Gu; Xin Gu; Hailong Zhang; Shisheng He
Journal:  PLoS One       Date:  2015-02-11       Impact factor: 3.240

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  5 in total

Review 1.  Machine Learning Algorithms in Neuroimaging: An Overview.

Authors:  Vittorio Stumpo; Julius M Kernbach; Christiaan H B van Niftrik; Martina Sebök; Jorn Fierstra; Luca Regli; Carlo Serra; Victor E Staartjes
Journal:  Acta Neurochir Suppl       Date:  2022

Review 2.  Current development and prospects of deep learning in spine image analysis: a literature review.

Authors:  Biao Qu; Jianpeng Cao; Chen Qian; Jinyu Wu; Jianzhong Lin; Liansheng Wang; Lin Ou-Yang; Yongfa Chen; Liyue Yan; Qing Hong; Gaofeng Zheng; Xiaobo Qu
Journal:  Quant Imaging Med Surg       Date:  2022-06

Review 3.  Artificial intelligence in spine care: current applications and future utility.

Authors:  Alexander L Hornung; Christopher M Hornung; G Michael Mallow; J Nicolás Barajas; Augustus Rush; Arash J Sayari; Fabio Galbusera; Hans-Joachim Wilke; Matthew Colman; Frank M Phillips; Howard S An; Dino Samartzis
Journal:  Eur Spine J       Date:  2022-03-27       Impact factor: 2.721

4.  A novel dual-network architecture for mixed-supervised medical image segmentation.

Authors:  Duo Wang; Ming Li; Nir Ben-Shlomo; C Eduardo Corrales; Yu Cheng; Tao Zhang; Jagadeesan Jayender
Journal:  Comput Med Imaging Graph       Date:  2021-03-03       Impact factor: 4.790

5.  Automatic Vertebral Body Segmentation Based on Deep Learning of Dixon Images for Bone Marrow Fat Fraction Quantification.

Authors:  Jiamin Zhou; Pablo F Damasceno; Ravi Chachad; Justin R Cheung; Alexander Ballatori; Jeffrey C Lotz; Ann A Lazar; Thomas M Link; Aaron J Fields; Roland Krug
Journal:  Front Endocrinol (Lausanne)       Date:  2020-09-02       Impact factor: 6.055

  5 in total

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