Literature DB >> 31143827

ssDNA viruses: key players in global virome.

V G Malathi1, P Renuka Devi2.   

Abstract

Single-stranded (ss)DNA viruses are extremely widespread, infect diverse hosts from all three domains of life and include important pathogens. Most ssDNA viruses possess small genomes that replicate by the rolling-circle-like mechanism initiated by a distinct virus-encoded endonuclease. High throughput genome sequencing and improved bioinformatics tools have yielded vast information on presence of ssDNA viruses in diverse habitats. The simple genome of ssDNA viruses have high propensity to undergo mutation and recombination often emerging as threat to human civilization. Interestingly their genome is found embedded in fossils dating back to million years. The unusual evolutionary history of ssDNA viruses reveal evidences of horizontal gene transfer, sometimes between different species and genera.

Entities:  

Keywords:  CRESS viruses; Rolling circle replication; ssDNA

Year:  2019        PMID: 31143827      PMCID: PMC6517461          DOI: 10.1007/s13337-019-00519-4

Source DB:  PubMed          Journal:  Virusdisease        ISSN: 2347-3584


  57 in total

1.  Aetiology: The earliest recorded plant virus disease.

Authors:  Keith Saunders; Ian D Bedford; Tetsukazu Yahara; John Stanley
Journal:  Nature       Date:  2003-04-24       Impact factor: 49.962

2.  Resolution of parvovirus dimer junctions proceeds through a novel heterocruciform intermediate.

Authors:  Susan F Cotmore; Peter Tattersall
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

3.  Geminivirus DNA replication and cell cycle interactions.

Authors:  Crisanto Gutierrez; Elena Ramirez-Parra; M Mar Castellano; Andres P Sanz-Burgos; Alejandro Luque; Riccardo Missich
Journal:  Vet Microbiol       Date:  2004-02-04       Impact factor: 3.293

4.  Geminivirus replication proteins are related to prokaryotic plasmid rolling circle DNA replication initiator proteins.

Authors:  E V Koonin; T V Ilyina
Journal:  J Gen Virol       Date:  1992-10       Impact factor: 3.891

5.  Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria.

Authors:  T V Ilyina; E V Koonin
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

6.  Two families of rep-like genes that probably originated by interspecies recombination are represented in viral, plasmid, bacterial, and parasitic protozoan genomes.

Authors:  Mark J Gibbs; Vladimir V Smeianov; James L Steele; Peter Upcroft; Boris A Efimov
Journal:  Mol Biol Evol       Date:  2006-03-10       Impact factor: 16.240

7.  Evidence for specificity of psittacine beak and feather disease viruses among avian hosts.

Authors:  Peter A Ritchie; Ian L Anderson; David M Lambert
Journal:  Virology       Date:  2003-02-01       Impact factor: 3.616

8.  Circular double-stranded forms of TT virus DNA in the liver.

Authors:  H Okamoto; M Ukita; T Nishizawa; J Kishimoto; Y Hoshi; H Mizuo; T Tanaka; Y Miyakawa; M Mayumi
Journal:  J Virol       Date:  2000-06       Impact factor: 5.103

9.  Replicative forms of TT virus DNA in bone marrow cells.

Authors:  H Okamoto; M Takahashi; T Nishizawa; A Tawara; Y Sugai; T Sai; T Tanaka; F Tsuda
Journal:  Biochem Biophys Res Commun       Date:  2000-04-13       Impact factor: 3.575

10.  Detecting recombination in TT virus: a phylogenetic approach.

Authors:  Franz Manni; Antonella Rotola; Elisabetta Caselli; Giorgio Bertorelle; Dario Di Luca
Journal:  J Mol Evol       Date:  2002-11       Impact factor: 2.395

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  6 in total

Review 1.  Global Organization and Proposed Megataxonomy of the Virus World.

Authors:  Eugene V Koonin; Valerian V Dolja; Mart Krupovic; Arvind Varsani; Yuri I Wolf; Natalya Yutin; F Murilo Zerbini; Jens H Kuhn
Journal:  Microbiol Mol Biol Rev       Date:  2020-03-04       Impact factor: 11.056

2.  Insights into the capsid structure of banana bunchy top virus.

Authors:  Sangita Venkataraman; Ramasamy Selvarajan; Sundaram S Subramanian; Savithri S Handanahalli
Journal:  3 Biotech       Date:  2022-06-07       Impact factor: 2.893

Review 3.  Nanovirus Disease Complexes: An Emerging Threat in the Modern Era.

Authors:  Aamir Lal; Thuy Thi Bich Vo; I Gusti Ngurah Prabu Wira Sanjaya; Phuong Thi Ho; Ji-Kwang Kim; Eui-Joon Kil; Sukchan Lee
Journal:  Front Plant Sci       Date:  2020-11-19       Impact factor: 5.753

4.  Lung microbiome of stable and exacerbated COPD patients in Tshwane, South Africa.

Authors:  T Goolam Mahomed; R P H Peters; M Allam; A Ismail; S Mtshali; A Goolam Mahomed; V Ueckermann; M M Kock; M M Ehlers
Journal:  Sci Rep       Date:  2021-10-05       Impact factor: 4.379

5.  Feline Stool-Associated Circular DNA Virus (FeSCV) in Diarrheic Cats in China.

Authors:  Xiangqi Hao; Yanchao Li; Xinkai Hu; Xueying Fu; Jie Dong; Haoyang Zhang; Pei Zhou; Shoujun Li
Journal:  Front Vet Sci       Date:  2021-06-16

6.  Fur Seal Feces-Associated Circular DNA Virus Identified in Pigs in Anhui, China.

Authors:  Zhibin Shi; Chunguo Liu; Hua Liu; Huanliang Yang; Yan Chen; Lili Wei; Zaisi Liu; Yongping Jiang; Xijun He; Jingfei Wang
Journal:  Virol Sin       Date:  2020-06-02       Impact factor: 4.327

  6 in total

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