Literature DB >> 10799591

Circular double-stranded forms of TT virus DNA in the liver.

H Okamoto1, M Ukita, T Nishizawa, J Kishimoto, Y Hoshi, H Mizuo, T Tanaka, Y Miyakawa, M Mayumi.   

Abstract

TT virus (TTV) is an unenveloped, circular, and single-stranded DNA virus commonly infecting human beings worldwide. TTV DNAs in paired serum and liver tissues from three viremic individuals were separated by gel electrophoresis and characterized biophysically. TTV DNAs in sera migrated in sizes ranging from 2.0 to 2.5 kb. TTV DNAs in liver tissues, however, migrated at 2.0 to 2.5 kb as well as at 3.5 to 6.1 kb. Both faster- and slower-migrating forms of TTV DNAs in the liver were found to be circular and of the full genomic length of 3.8 kb. TTV DNAs migrating at 2.0 to 2.5 kb, from either serum or liver tissues, were sensitive to S1 nuclease but resistant to restriction endonucleases, and therefore, they were single-stranded. By contrast, TTV DNAs in liver tissues that migrated at 3.5 to 6.1 kb were resistant to S1 nuclease. They migrated at 3.7 to 4.0 kb after digestion with EcoRI, which suggests that they represent circular, double-stranded replicative intermediates of TTV. When TTV DNAs were subjected to strand-specific primer extension and then amplified by PCR with internal primers, those in serum were found to be minus-stranded DNAs while those in liver tissues were found to be a mixture of plus- and minus-stranded DNAs. These results suggest that TTV replicates in the liver via a circular double-stranded DNA.

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Year:  2000        PMID: 10799591      PMCID: PMC110869          DOI: 10.1128/jvi.74.11.5161-5167.2000

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  32 in total

1.  Analyses of TT virus full-length genomic sequences.

Authors:  J C Erker; T P Leary; S M Desai; M L Chalmers; I K Mushahwar
Journal:  J Gen Virol       Date:  1999-07       Impact factor: 3.891

2.  TT viruses (TTV) of non-human primates and their relationship to the human TTV genotypes.

Authors:  Ernst J Verschoor; Susan Langenhuijzen; Jonathan L Heeney
Journal:  J Gen Virol       Date:  1999-09       Impact factor: 3.891

3.  Marked genomic heterogeneity and frequent mixed infection of TT virus demonstrated by PCR with primers from coding and noncoding regions.

Authors:  H Okamoto; M Takahashi; T Nishizawa; M Ukita; M Fukuda; F Tsuda; Y Miyakawa; M Mayumi
Journal:  Virology       Date:  1999-07-05       Impact factor: 3.616

4.  The entire nucleotide sequence of a TT virus isolate from the United States (TUS01): comparison with reported isolates and phylogenetic analysis.

Authors:  H Okamoto; T Nishizawa; M Ukita; M Takahashi; M Fukuda; H Iizuka; Y Miyakawa; M Mayumi
Journal:  Virology       Date:  1999-07-05       Impact factor: 3.616

5.  Detection of a novel DNA virus (TTV) sequence in peripheral blood mononuclear cells.

Authors:  A Okamura; M Yoshioka; M Kubota; H Kikuta; H Ishiko; K Kobayashi
Journal:  J Med Virol       Date:  1999-06       Impact factor: 2.327

6.  Identification of a novel GC-rich 113-nucleotide region to complete the circular, single-stranded DNA genome of TT virus, the first human circovirus.

Authors:  H Miyata; H Tsunoda; A Kazi; A Yamada; M A Khan; J Murakami; T Kamahora; K Shiraki; S Hino
Journal:  J Virol       Date:  1999-05       Impact factor: 5.103

7.  Complete circular DNA genome of a TT virus variant (isolate name SANBAN) and 44 partial ORF2 sequences implicating a great degree of diversity beyond genotypes.

Authors:  M Hijikata; K Takahashi; S Mishiro
Journal:  Virology       Date:  1999-07-20       Impact factor: 3.616

8.  Molecular and biophysical characterization of TT virus: evidence for a new virus family infecting humans.

Authors:  I K Mushahwar; J C Erker; A S Muerhoff; T P Leary; J N Simons; L G Birkenmeyer; M L Chalmers; T J Pilot-Matias; S M Dexai
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

9.  Improved detection systems for TT virus reveal high prevalence in humans, non-human primates and farm animals.

Authors:  Thomas P Leary; James C Erker; Michelle L Chalmers; Suresh M Desai; Isa K Mushahwar
Journal:  J Gen Virol       Date:  1999-08       Impact factor: 3.891

10.  Beak and feather disease virus and porcine circovirus genomes: intermediates between the geminiviruses and plant circoviruses.

Authors:  F D Niagro; A N Forsthoefel; R P Lawther; L Kamalanathan; B W Ritchie; K S Latimer; P D Lukert
Journal:  Arch Virol       Date:  1998       Impact factor: 2.574

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  20 in total

1.  Sequestration of TT virus of restricted genotypes in peripheral blood mononuclear cells.

Authors:  H Okamoto; M Takahashi; N Kato; M Fukuda; A Tawara; S Fukuda; T Tanaka; Y Miyakawa; M Mayumi
Journal:  J Virol       Date:  2000-11       Impact factor: 5.103

2.  Isolation of multiple TT virus genotypes from spleen biopsy tissue from a Hodgkin's disease patient: genome reorganization and diversity in the hypervariable region.

Authors:  Ilijas Jelcic; Agnes Hotz-Wagenblatt; Andreas Hunziker; Harald Zur Hausen; Ethel-Michele de Villiers
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

3.  The diversity of torque teno viruses: in vitro replication leads to the formation of additional replication-competent subviral molecules.

Authors:  Ethel-Michele de Villiers; Silvia S Borkosky; Romana Kimmel; Karin Gunst; Jian-Wei Fei
Journal:  J Virol       Date:  2011-05-18       Impact factor: 5.103

Review 4.  ssDNA viruses: key players in global virome.

Authors:  V G Malathi; P Renuka Devi
Journal:  Virusdisease       Date:  2019-04-19

5.  Dynamics of persistent TT virus infection, as determined in patients treated with alpha interferon for concomitant hepatitis C virus infection.

Authors:  F Maggi; M Pistello; M Vatteroni; S Presciuttini; S Marchi; P Isola; C Fornai; S Fagnani; E Andreoli; G Antonelli; M Bendinelli
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

Review 6.  Transfusion transmitted virus: A review on its molecular characteristics and role in medicine.

Authors:  M Irshad; Y K Joshi; Y Sharma; I Dhar
Journal:  World J Gastroenterol       Date:  2006-08-28       Impact factor: 5.742

7.  Total chemical synthesis, assembly of human torque teno virus genome.

Authors:  Zheng Hou; Gengfu Xiao
Journal:  Virol Sin       Date:  2011-06-12       Impact factor: 4.327

Review 8.  Molecular properties, biology, and clinical implications of TT virus, a recently identified widespread infectious agent of humans.

Authors:  M Bendinelli; M Pistello; F Maggi; C Fornai; G Freer; M L Vatteroni
Journal:  Clin Microbiol Rev       Date:  2001-01       Impact factor: 26.132

9.  In vivo and in vitro intragenomic rearrangement of TT viruses.

Authors:  Ludmila Leppik; Karin Gunst; Matti Lehtinen; Joakim Dillner; Karin Streker; Ethel-Michele de Villiers
Journal:  J Virol       Date:  2007-06-27       Impact factor: 5.103

10.  Association of torque teno virus (TTV) and torque teno mini virus (TTMV) with liver disease among patients coinfected with human immunodeficiency virus and hepatitis C virus.

Authors:  M García-Álvarez; J Berenguer; E Alvarez; M Guzmán-Fulgencio; J Cosín; P Miralles; P Catalán; J C López; J Ma Rodríguez; D Micheloud; Ma A Muñoz-Fernández; S Resino
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2012-09-16       Impact factor: 3.267

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