| Literature DB >> 31140963 |
Philippe M de Lajudie1, Mitchell Andrews2, Julie Ardley3, Bertrand Eardly4, Estelle Jumas-Bilak5, Nemanja Kuzmanović6, Florent Lassalle7, Kristina Lindström8, Ridha Mhamdi9, Esperanza Martínez-Romero10, Lionel Moulin11, Seyed Abdollah Mousavi8, Xavier Nesme12, Alvaro Peix13, Joanna Puławska14, Emma Steenkamp15, Tomasz Stępkowski16, Chang-Fu Tian17, Pablo Vinuesa10, Gehong Wei18, Anne Willems19, Jerri Zilli20, Peter Young21.
Abstract
Herein the members of the Subcommittee on Taxonomy of Rhizobia and Agrobacteria of the International Committee on Systematics of Prokaryotes review recent developments in rhizobial and agrobacterial taxonomy and propose updated minimal standards for the description of new species (and genera) in these groups. The essential requirements (minimal standards) for description of a new species are (1) a genome sequence of at least the proposed type strain and (2) evidence for differentiation from other species based on genome sequence comparisons. It is also recommended that (3) genetic variation within the species is documented with sequence data from several clearly different strains and (4) phenotypic features are described, and their variation documented with data from a relevant set of representative strains. Furthermore, it is encouraged that information is provided on (5) nodulation or pathogenicity phenotypes, as appropriate, with relevant gene sequences. These guidelines supplement the current rules of general bacterial taxonomy, which require (6) a name that conforms to the International Code of Nomenclature of Prokaryotes, (7) validation of the name by publication either directly in the International Journal of Systematic and Evolutionary Microbiology or in a validation list when published elsewhere, and (8) deposition of the type strain in two international culture collections in separate countries.Keywords: Minimal standards for taxonomy; agrobacteria; genome-based taxonomy; rhizobia
Mesh:
Year: 2019 PMID: 31140963 DOI: 10.1099/ijsem.0.003426
Source DB: PubMed Journal: Int J Syst Evol Microbiol ISSN: 1466-5026 Impact factor: 2.747