Literature DB >> 31133693

Community ecology as a framework for human microbiome research.

Jack A Gilbert1, Susan V Lynch2.   

Abstract

The field of human microbiome research has revealed the intimate co-association of humans with diverse communities of microbes in various habitats in the human body, and the necessity of these microbes for the maintenance of human health. Microbial heterogeneity between humans and across spatial and temporal gradients requires multidimensional datasets and a unifying set of theories and statistical tools to analyze the human microbiome and fully realize the potential of this field. Here we consider the utility of community ecology as a framework for the interrogation and interpretation of the human microbiome.

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Year:  2019        PMID: 31133693      PMCID: PMC7410146          DOI: 10.1038/s41591-019-0464-9

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  1 in total

Review 1.  Bacterial Quorum Sensing and Microbial Community Interactions.

Authors:  Rhea G Abisado; Saida Benomar; Jennifer R Klaus; Ajai A Dandekar; Josephine R Chandler
Journal:  mBio       Date:  2018-05-22       Impact factor: 7.867

  1 in total
  25 in total

Review 1.  Re-examining causes of surgical site infections following elective surgery in the era of asepsis.

Authors:  John C Alverdy; Neil Hyman; Jack Gilbert
Journal:  Lancet Infect Dis       Date:  2020-01-29       Impact factor: 25.071

2.  Dynamic metabolic interactions and trophic roles of human gut microbes identified using a minimal microbiome exhibiting ecological properties.

Authors:  Sudarshan A Shetty; Ioannis Kostopoulos; Sharon Y Geerlings; Hauke Smidt; Willem M de Vos; Clara Belzer
Journal:  ISME J       Date:  2022-06-18       Impact factor: 11.217

3.  Individuality of the Extremely Premature Infant Gut Microbiota Is Driven by Ecological Drift.

Authors:  David Seki; Clemens Schauberger; Bela Hausmann; Angelika Berger; Lukas Wisgrill; David Berry
Journal:  mSystems       Date:  2022-04-27       Impact factor: 7.324

Review 4.  Dysbiosis: from fiction to function.

Authors:  Connor R Tiffany; Andreas J Bäumler
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2019-09-11       Impact factor: 4.052

Review 5.  Using ecological coexistence theory to understand antibiotic resistance and microbial competition.

Authors:  Andrew D Letten; Alex R Hall; Jonathan M Levine
Journal:  Nat Ecol Evol       Date:  2021-02-01       Impact factor: 15.460

Review 6.  Gut microbiome, liver immunology, and liver diseases.

Authors:  Rui Wang; Ruqi Tang; Bo Li; Xiong Ma; Bernd Schnabl; Herbert Tilg
Journal:  Cell Mol Immunol       Date:  2020-12-14       Impact factor: 11.530

7.  Microbiota, Epigenetics, and Trained Immunity. Convergent Drivers and Mediators of the Asthma Trajectory from Pregnancy to Childhood.

Authors:  Susan V Lynch; Donata Vercelli
Journal:  Am J Respir Crit Care Med       Date:  2021-04-01       Impact factor: 21.405

Review 8.  Ecological interactions in asthma: from environment to microbiota and immune responses.

Authors:  Ariangela Kozik; Yvonne J Huang
Journal:  Curr Opin Pulm Med       Date:  2020-01       Impact factor: 2.868

9.  Timing of Tributyrin Supplementation Differentially Modulates Gastrointestinal Inflammation and Gut Microbial Recolonization Following Murine Ileocecal Resection.

Authors:  Valentin Mocanu; Heekuk Park; Jerry Dang; Naomi Hotte; Aducio Thiesen; Michael Laffin; Haili Wang; Daniel Birch; Karen Madsen
Journal:  Nutrients       Date:  2021-06-17       Impact factor: 5.717

Review 10.  Microbiota and human allergic diseases: the company we keep.

Authors:  Donata Vercelli
Journal:  Curr Opin Immunol       Date:  2021-06-26       Impact factor: 7.268

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