Literature DB >> 31128778

Design, construction, and validation of optogenetic proteins.

Colin P O'Banion1, Anwesha Goswami1, David S Lawrence2.   

Abstract

Cellular optogenetics employs light-regulated, genetically encoded protein actuators to perturb cellular signaling with unprecedented spatial and temporal control. Here, we present a potentially generalized approach for transforming a given protein of interest (POI) into an optogenetic species. We describe the rational and methods by which we developed three different optogenetic POIs utilizing the Cry2-Cib photodimerizing pair. The process pipeline is highlighted by (1) developing a low level, constitutively active POI that is independent of endogenous regulation, (2) fusion of the mutant protein of interest to an optogenetic photodimerizing system, and (3) light-mediated recruitment of the light-responsive POI to specific subcellular regions.
© 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Apoptosis; Biochemical signaling; Motility; Optogenetics; Protein design

Mesh:

Substances:

Year:  2019        PMID: 31128778      PMCID: PMC7003698          DOI: 10.1016/bs.mie.2019.02.019

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  11 in total

1.  Conformation of the Bax C-terminus regulates subcellular location and cell death.

Authors:  A Nechushtan; C L Smith; Y T Hsu; R J Youle
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

2.  Optogenetic engineering: light-directed cell motility.

Authors:  Robert M Hughes; David S Lawrence
Journal:  Angew Chem Int Ed Engl       Date:  2014-08-25       Impact factor: 15.336

3.  Lifeact: a versatile marker to visualize F-actin.

Authors:  Julia Riedl; Alvaro H Crevenna; Kai Kessenbrock; Jerry Haochen Yu; Dorothee Neukirchen; Michal Bista; Frank Bradke; Dieter Jenne; Tad A Holak; Zena Werb; Michael Sixt; Roland Wedlich-Soldner
Journal:  Nat Methods       Date:  2008-06-08       Impact factor: 28.547

4.  Dissecting the cooperative reassociation of the regulatory and catalytic subunits of cAMP-dependent protein kinase. Role of Trp-196 in the catalytic subunit.

Authors:  R M Gibson; S S Taylor
Journal:  J Biol Chem       Date:  1997-12-19       Impact factor: 5.157

5.  Initiation of cofilin activity in response to EGF is uncoupled from cofilin phosphorylation and dephosphorylation in carcinoma cells.

Authors:  Xiaoyan Song; Xiaoming Chen; Hideki Yamaguchi; Ghassan Mouneimne; John S Condeelis; Robert J Eddy
Journal:  J Cell Sci       Date:  2006-06-27       Impact factor: 5.285

Review 6.  Optogenetics: A Primer for Chemists.

Authors:  Colin P O'Banion; David S Lawrence
Journal:  Chembiochem       Date:  2018-05-14       Impact factor: 3.164

7.  Optogenetic apoptosis: light-triggered cell death.

Authors:  Robert M Hughes; David J Freeman; Kelsey N Lamb; Rebecca M Pollet; Weston J Smith; David S Lawrence
Journal:  Angew Chem Int Ed Engl       Date:  2015-08-25       Impact factor: 15.336

8.  The actin-severing activity of cofilin is exerted by the interplay of three distinct sites on cofilin and essential for cell viability.

Authors:  Kenji Moriyama; Ichiro Yahara
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

9.  Design and Profiling of a Subcellular Targeted Optogenetic cAMP-Dependent Protein Kinase.

Authors:  Colin P O'Banion; Melanie A Priestman; Robert M Hughes; Laura E Herring; Stephen J Capuzzi; David S Lawrence
Journal:  Cell Chem Biol       Date:  2017-11-05       Impact factor: 8.116

10.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

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