Literature DB >> 31126938

Hydrocarbon-Degrading Microbial Communities Are Site Specific, and Their Activity Is Limited by Synergies in Temperature and Nutrient Availability in Surface Ocean Waters.

Xiaoxu Sun1,2, Joel E Kostka3,4.   

Abstract

The objective of this study was to quantify the potential for hydrocarbon biodegradation in surface waters of three sites, representing geographic regions of major oil exploration (Beaufort Sea in the Arctic, northern Gulf of Mexico [GOM], and southern GOM), in a systematic experimental design that incorporated gradients in temperature and the availability of major nutrients. Surface seawater was amended in microcosms with Macondo surrogate oil to simulate an oil slick, and microcosms were incubated, with or without nutrient amendment, at temperatures ranging from 4 to 38ºC. Using respiration rate as a proxy, distinct temperature responses were observed in surface seawater microcosms based on geographic origin; biodegradation was nearly always more rapid in the Arctic site samples than in the GOM samples. Nutrient amendment enhanced respiration rates by a factor of approximately 6, stimulated microbial growth, and generally elevated the taxonomic diversity of microbial communities within the optimal temperature range for activity at each site, while diversity remained the same or was lower at temperatures deviating from optimal conditions. Taken together, our results advance the understanding of how bacterioplankton communities from different geographic regions respond to oil perturbation. A pulsed disturbance of oil is proposed to favor copiotrophic r-strategists that are adapted to pointed seasonal inputs of phytoplankton carbon, displaying carbon and nutrient limitations, rather than oil exposure history. Further understanding of the ecological mechanisms underpinning the complex environmental controls of hydrocarbon degradation is required for improvement of predictive models of the fate and transport of spilled oil in marine environments.IMPORTANCE The risk of an oil spill accident in pristine regions of the world's oceans is increasing due to the development and transport of crude oil resources, especially in the Arctic region, as a result of the opening of ice-free transportation routes, and there is currently no consensus regarding the complex interplay among the environmental controls of petroleum hydrocarbon biodegradation for predictive modeling. We examined the hydrocarbon biodegradation potential of bacterioplankton from three representative geographic regions of oil exploration. Our results showed that rates of aerobic respiration coupled to hydrocarbon degradation in surface ocean waters are controlled to a large extent by effects of temperature and nutrient limitation; hydrocarbon exposure history did not appear to have a major impact. Further, the relationship between temperature and biodegradation rates is linked to microbial community structure, which is specific to the geographic origin.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  biodegradation; hydrocarbons; microbial communities; nutrients; oil; temperature

Mesh:

Substances:

Year:  2019        PMID: 31126938      PMCID: PMC6643229          DOI: 10.1128/AEM.00443-19

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  83 in total

1.  Biodegradation of petroleum products in experimental plots in Antarctic marine sediments is location dependent.

Authors:  Shane M Powell; Paul McA Harvey; Jonathan S Stark; Ian Snape; Martin J Riddle
Journal:  Mar Pollut Bull       Date:  2007-01-11       Impact factor: 5.553

2.  Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.

Authors:  Brandon K Swan; Ben Tupper; Alexander Sczyrba; Federico M Lauro; Manuel Martinez-Garcia; José M González; Haiwei Luo; Jody J Wright; Zachary C Landry; Niels W Hanson; Brian P Thompson; Nicole J Poulton; Patrick Schwientek; Silvia G Acinas; Stephen J Giovannoni; Mary Ann Moran; Steven J Hallam; Ricardo Cavicchioli; Tanja Woyke; Ramunas Stepanauskas
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

3.  Diazotroph Community Characterization via a High-Throughput nifH Amplicon Sequencing and Analysis Pipeline.

Authors:  John Christian Gaby; Lavanya Rishishwar; Lina C Valderrama-Aguirre; Stefan J Green; Augusto Valderrama-Aguirre; I King Jordan; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2018-01-31       Impact factor: 4.792

4.  The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes.

Authors:  David L Kirchman; Matthew T Cottrell; Connie Lovejoy
Journal:  Environ Microbiol       Date:  2010-02-03       Impact factor: 5.491

Review 5.  Using dispersants after oil spills: impacts on the composition and activity of microbial communities.

Authors:  Sara Kleindienst; John H Paul; Samantha B Joye
Journal:  Nat Rev Microbiol       Date:  2015-05-06       Impact factor: 60.633

6.  Hydrocarbon-Degrading Microbial Communities Are Site Specific, and Their Activity Is Limited by Synergies in Temperature and Nutrient Availability in Surface Ocean Waters.

Authors:  Xiaoxu Sun; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

7.  Alcanivorax gelatiniphagus sp. nov., a marine bacterium isolated from tidal flat sediments enriched with crude oil.

Authors:  Kae Kyoung Kwon; Ji Hye Oh; Sung-Hyun Yang; Hyun-Seok Seo; Jung-Hyun Lee
Journal:  Int J Syst Evol Microbiol       Date:  2015-04-09       Impact factor: 2.747

8.  Distribution and concentrations of petroleum hydrocarbons associated with the BP/Deepwater Horizon Oil Spill, Gulf of Mexico.

Authors:  Paul W Sammarco; Steve R Kolian; Richard A F Warby; Jennifer L Bouldin; Wilma A Subra; Scott A Porter
Journal:  Mar Pollut Bull       Date:  2013-07-04       Impact factor: 5.553

9.  Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance.

Authors:  Terrence H Bell; Etienne Yergeau; Christine Maynard; David Juck; Lyle G Whyte; Charles W Greer
Journal:  ISME J       Date:  2013-02-07       Impact factor: 10.302

10.  Oil biodegradation and bioremediation: a tale of the two worst spills in U.S. history.

Authors:  Ronald M Atlas; Terry C Hazen
Journal:  Environ Sci Technol       Date:  2011-07-08       Impact factor: 9.028

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  4 in total

1.  Hydrocarbon-Degrading Microbial Communities Are Site Specific, and Their Activity Is Limited by Synergies in Temperature and Nutrient Availability in Surface Ocean Waters.

Authors:  Xiaoxu Sun; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

2.  Methylotrophs and Hydrocarbon-Degrading Bacteria Are Key Players in the Microbial Community of an Abandoned Century-Old Oil Exploration Well.

Authors:  Diego Rojas-Gätjens; Paola Fuentes-Schweizer; Keilor Rojas-Jiménez; Danilo Pérez-Pantoja; Roberto Avendaño; Randall Alpízar; Carolina Coronado-Ruíz; Max Chavarría
Journal:  Microb Ecol       Date:  2021-04-17       Impact factor: 4.552

3.  Genome-resolved analyses show an extensive diversification in key aerobic hydrocarbon-degrading enzymes across bacteria and archaea.

Authors:  Maryam Rezaei Somee; Mohammad Ali Amoozegar; Seyed Mohammad Mehdi Dastgheib; Mahmoud Shavandi; Leila Ghanbari Maman; Stefan Bertilsson; Maliheh Mehrshad
Journal:  BMC Genomics       Date:  2022-10-06       Impact factor: 4.547

4.  A Rotational Slurry Bioreactor Accelerates Biodegradation of A-Fuel in Oil-Contaminated Soil Even under Low Temperature Conditions.

Authors:  Yuna Miyoshi; Jo Okada; Tomotaka Urata; Masaki Shintani; Kazuhide Kimbara
Journal:  Microorganisms       Date:  2020-02-20
  4 in total

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