| Literature DB >> 31123222 |
Dan Jiang1,2, Ying Wang1, Guanglei Chang1, Qin Duan3, Linna You1, Min Sun1, Chunxiao Hu1,2, Lei Gao1,2, Shiyong Wu1,2, Hongmei Tao1, Kai Lu1, Dongying Zhang1.
Abstract
Little is known about the diagnostic value of DNA methylation and hydroxymethylation for coronary atherosclerosis. Carotid plaque is a common marker for coronary atherosclerosis. Our aim is to determine whether DNA methylation and hydroxymethylation combined with carotid plaques can be useful to the diagnosis of coronary atherosclerosis. The 5-methylcytosine (5-mC) and 5-hydroxymethylcytosine (5-hmC) levels from peripheral blood mononuclear cells (PBMCs) were measured in 113 enrolled patients. Crouse score and Gensini score were used to evaluate the severity of carotid and coronary atherosclerosis, respectively. With the increasing of severity of carotid plaque, a stepwise upward trend was observed in 5-mC and 5-hmC levels from PBMCs, which were significantly correlated with the risk factors, Crouse score and Gensini score. Crouse score and 5-hmC, not 5-mC, were the risk factors for coronary atherosclerosis after adjustment for the risk factors (the history of diabetes, FPG and HbA1c). Receiver operating characteristic (ROC) analysis indicated that 5-hmC combined with Crouse score was the diagnostic biomarker for coronary atherosclerosis, with the highest areas under the curve (AUC) for 0.980 (0.933-0.997), valuable sensitivity for 96.23% and specificity for 91.67%. These findings suggest 5-hmC level combined with Crouse score may provide the meaningful information for coronary atherosclerosis diagnosis.Entities:
Keywords: carotid plaque; coronary atherosclerosis; hydroxymethylation; methylation
Mesh:
Substances:
Year: 2019 PMID: 31123222 PMCID: PMC6555448 DOI: 10.18632/aging.101972
Source DB: PubMed Journal: Aging (Albany NY) ISSN: 1945-4589 Impact factor: 5.682
Baseline characteristics of different degrees of carotid atherosclerosis.
| Male/Female | 9/13 | 17/14 | 19/11 | 19/11 | 0.348 |
| Age (years) | 72.77±4.84 | 73.39±5.77 | 72.77±4.55 | 73.07±5.66 | 0.965 |
| Smoker (n) | 4 (18.2%) | 10 (32.3%) | 12 (40.0%) | 15 (50.0%) | 0.118 |
| History of HP (n) | 12 (54.5%) | 16 (51.6%) | 22 (73.3%) | 23 (76.7%) | 0.105 |
| History of DM (n) | 5 (22.7%) | 11 (35.5%) | 13 (43.3%) | 13 (43.3%) | 0.413 |
| CHD (n) | 0 | 12 (38.7%)* | 17 (56.7%)* | 24 (80.0%)*# | <0.001 |
| Stroke (n) | 1 (4.5%) | 1 (3.2%) | 4 (13.3%) | 6 (20.0%) | 0.147 |
| BMI (Kg/m2) | 24.70±3.64 | 24.51±2.83 | 24.13±2.78 | 24.36±3.39 | 0.924 |
| FPG (mmol/L) | 5.20 (4.95–5.50) | 5.40 (5.10–6.00) | 5.90 (5.43–7.5) * | 5.50 (5.20–6.23) | 0.020 |
| HbA1c (%) | 6.00 (5.70–6.20) | 5.90 (5.60–6.30) | 6.20 (5.68–6.93) | 6.00 (5.70–7.15) | 0.673 |
| TC (mmol/L) | 3.09 (1.18–4.58) | 3.36 (2.24–4.86) | 3.91 (3.12–4.31) | 3.93 (2.90–4.74) | 0.439 |
| TG (mmol/L) | 1.17 (0.77–1.74) | 1.16 (0.86–1.92) | 1.40 (0.94–1.99) | 1.42 (1.00–2.26) | 0.227 |
| LDL-c (mmol/L) | 2.21±1.08 | 2.30±1.08 | 2.53±0.86 | 2.24±1.02 | 0.843 |
| HDL-c (mmol/L) | 1.63 (1.30–2.78) | 1.22 (1.04–1.99) | 1.22 (1.05–1.50) | 1.34 (0.94–2.39) | 0.151 |
| hs-CRP (mg/L) | 1.02 (0.33–3.47) | 1.49 (0.59–4.08) | 1.33 (1.04–4.78) | 1.08 (0.56–5.35) | 0.542 |
| CIMT (mm) | 0.75 (0.65–0.85) | 0.75 (0.70–0.85) | 0.80 (0.75–0.90) | 0.85 (0.75–1.00)* | 0.014 |
| Crouse score | 0 | 1.90 (1.60–2.60)* | 4.20 (3.60–4.90)*# | 6.75 (6.38–7.63)*# | <0.001 |
| Gensini score | 0 | 0 (0–57.0) | 20.0 (0–86.1)*# | 42.8 (20.4–74.5)*# | <0.001 |
| 5-mC (%) | 2.81 (2.04–3.39) | 3.09 (2.64–3.75) | 3.40 (2.96–4.21)* | 3.86 (3.34–4.90)*# | <0.001 |
| 5-hmC (%) | 0.06 (0.03–0.09) | 0.08 (0.04–0.19) | 0.17 (0.09–0.30)* | 0.22 (0.12–0.30)*# | <0.001 |
Data are presented as mean ± SD, median (interquartile ranges), or number (%). HP, hypertension; DM, diabetes mellitus; CHD, coronary heart disease; BMI, body mass index; FPG, fasting plasma glucose; HbA1c, glycosylated hemoglobin; TC, total cholesterol; TG, triglycerides; LDL-c, low-density lipoprotein cholesterol; HDL-c, high-density lipoprotein cholesterol; hs-CRP, high sensitivity C reactive protein; CIMT, carotid intima media thickness. * P<0.05 comparing with control group; # P<0.05 comparing with bottom tertile group.
Figure 1Associations between the percentage of 5-mC (A), 5-hmC (B) and the severity of carotid atherosclerosis in CAS patients (evaluated by plaque thickness). * P<0.05; ** P<0.01; *** P<0.001.
Spearman correlation coefficients of the percentage of 5-mC, 5-hmC and Gensini score with selected covariates.
| FPG (mmol/L) | 0.260 | 0.005 | 0.343 | <0.001 | 0.356 | <0.001 |
| HbA1c (%) | 0.149 | 0.116 | 0.189 | 0.045 | 0.250 | 0.007 |
| TC (mmol/L) | –0.083 | 0.385 | 0.030 | 0.751 | 0.113 | 0.234 |
| TG (mmol/L) | 0.226 | 0.016 | 0.176 | 0.066 | 0.265 | 0.005 |
| LDL-c (mmol/L) | 0.002 | 0.981 | 0.059 | 0.531 | 0.173 | 0.067 |
| HDL-c (mmol/L) | –0.096 | 0.312 | –0.246 | 0.009 | –0.322 | 0.001 |
| hs-CRP (mg/L) | 0.122 | 0.198 | 0.181 | 0.055 | 0.179 | 0.058 |
| CIMT (mm) | 0.125 | 0.188 | 0.115 | 0.224 | 0.162 | 0.087 |
| Crouse score | 0.471 | <0.001 | 0.509 | <0.001 | 0.546 | <0.001 |
| 5-mC (%) | - | - | 0.579 | <0.001 | 0.469 | <0.001 |
| 5-hmC (%) | 0.579 | <0.001 | - | - | 0.745 | <0.001 |
Univariate and multivariate binary logistic regression analysis of cardiovascular risk factors to predict the risk of coronary atherosclerosis.
| Male/Female | 0.481 (0.225–1.030) | 0.060 | ||
| Age (years) | 1.024 (0.953–1.100) | 0.511 | ||
| Smoker (n) | 2.093 (0.096–4.565) | 0.063 | ||
| History of HP | 2.130 (0.961–4.722) | 0.063 | ||
| History of DM | 3.680 (1.645–8.235) | 0.002 | 4.487 (0.227–88.680) | 0.324 |
| Stroke | 2.489 (0.704–8.798) | 0.157 | ||
| BMI (Kg/m2) | 1.048 (0.930–1.182) | 0.442 | ||
| FPG (mmol/L) | 1.782 (1.219–2.605) | 0.003 | 0.972 (0.307–3.071) | 0.961 |
| HbA1c (%) | 1.785 (1.191–2.674) | 0.005 | 2.861 (0.717–11.422) | 0.137 |
| TC (mmol/L) | 1.171 (0.913–1.502) | 0.214 | ||
| LDL-c (mmol/L) | 1.383 (0.939–2.036) | 0.100 | ||
| HDL-c (mmol/L) | 0.763 (0.544–1.070) | 0.117 | ||
| hs-CRP (mg/L) | 1.099 (1.020–1.184) | 0.014 | 1.268 (1.013–1.588) | 0.038 |
| Crouse score | 1.795 (1.445–2.230) | <0.001 | 1.863 (1.053–3.297) | 0.033 |
| 5-mC (%) | 3.221 (1.851–5.604) | <0.001 | 0.983 (0.386–2.505) | 0.972 |
| 5-hmC (%) per 0.01% | 1.484 (1.265–1.741) | <0.001 | 1.767 (1.250–2.499) | 0.001 |
OR = odds ratio; 95% CI = 95% confidence intervals; Odds ratio more than 1 indicates that hs-CRP, Crouse score and 5-hmC are risk factors. The OR value of 5-hmC represents altered risk of coronary atherosclerosis odds per 0.01% change in 5-hmC level.
The ROC curve parameters of 5-mC, 5-hmC, Crouse score and their combinations for diagnosing coronary atherosclerosis.
| 5-hmC+ Crouse score | 0.980 | 0.933–0.997 | 0.8789 | 0.17 | 96.23 | 91.67 |
| 5-hmC | 0.961 | 0.907–0.988 | 0.9101 | 0.12 | 94.34 | 96.67 |
| 5-mC+ Crouse score | 0.865 | 0.788–0.922 | 0.5934 | 4.52 | 94.34 | 65.00 |
| Crouse score | 0.831 | 0.749–0.895 | 0.5013 | 2.50 | 86.79 | 63.33 |
| 5-mC | 0.800 | 0.714–0.869 | 0.5126 | 3.53 | 67.92 | 83.33 |
*Cut-off point were determined according to the ‘Youden index’ derived directly from the ROC curves.
Figure 2Comparisons of diagnostic power among 5-mC, 5-hmC, Crouse score and their combination for coronary atherosclerosis by ROC curves. (A, B) The AUC was 0.865 for 5-mC+Crouse score (blue line), 0.800 for 5-mC (yellow line), 0.831 for Crouse score (green line), 0.980 for 5-hmC+ Crouse score (red line) and 0.961 for 5-hmC (purple line).