Literature DB >> 31117392

Bacterial Tetrabromopyrrole Debrominase Shares a Reductive Dehalogenation Strategy with Human Thyroid Deiodinase.

Jonathan R Chekan1, Ga Young Lee2, Abrahim El Gamal1, Trevor N Purdy1, K N Houk2, Bradley S Moore1,3.   

Abstract

Enzymatic dehalogenation is an important and well-studied biological process in both the detoxification and catabolism of small molecules, many of which are anthropogenic in origin. However, dedicated dehalogenation reactions that replace a halogen atom with a hydrogen are rare in the biosynthesis of natural products. In fact, the debrominase Bmp8 is the only known example. It catalyzes the reductive debromination of the coral settlement cue and the potential human toxin 2,3,4,5-tetrabromopyrrole as part of the biosynthesis of the antibiotic pentabromopseudilin. Using a combination of protein crystallography, mutagenesis, and computational modeling, we propose a catalytic mechanism for Bmp8 that is reminiscent of that catalyzed by human deiodinases in the maintenance of thyroid hormones. The identification of the key catalytic residues enabled us to recognize divergent functional homologues of Bmp8. Characterization of one of these homologues demonstrated its debromination activity even though it is found in a completely distinct genomic context. This observation suggests that additional enzymes outside those associated with the tetrabromopyrrole biosynthetic pathway may be able to alter the lifetime of this compound in the environment.

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Year:  2019        PMID: 31117392      PMCID: PMC6872904          DOI: 10.1021/acs.biochem.9b00318

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  41 in total

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Authors:  Balázs Gereben; Ann Marie Zavacki; Scott Ribich; Brian W Kim; Stephen A Huang; Warner S Simonides; Anikó Zeöld; Antonio C Bianco
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Review 5.  Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks.

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Journal:  Biochim Biophys Acta       Date:  2015-04-18

6.  The crystal structure of Mycobacterium tuberculosis alkylhydroperoxidase AhpD, a potential target for antitubercular drug design.

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9.  Discovery of a pathway for terminal-alkyne amino acid biosynthesis.

Authors:  J A Marchand; M E Neugebauer; M C Ing; C-I Lin; J G Pelton; M C Y Chang
Journal:  Nature       Date:  2019-03-13       Impact factor: 49.962

10.  Dali server: conservation mapping in 3D.

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Journal:  Nucleic Acids Res       Date:  2010-05-10       Impact factor: 16.971

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  1 in total

Review 1.  Cryptic halogenation reactions in natural product biosynthesis.

Authors:  Sanjoy Adak; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2021-10-20       Impact factor: 15.111

  1 in total

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