Literature DB >> 31115081

Cross-sectional HIV incidence estimation in an evolving epidemic.

Doug Morrison1, Oliver Laeyendecker2, Ron Brookmeyer1.   

Abstract

The cross-sectional approach to HIV incidence estimation overcomes some of the challenges with longitudinal cohort studies and has been successfully applied in many settings around the world. However, the cross-sectional approach does rely on an initial training data set to develop and calibrate the statistical methods to be used in cross-sectional surveys. The problem addressed in this paper is that the initial training data set may, over time, not reflect the current target population of interest because of evolution of the epidemic. For example, the mismatch between the target population and the initial data set could occur because of increasing use of anti-retroviral therapy among HIV-infected persons throughout the world. We developed methods to adjust the initial training data set with the goal that the adjusted data sets better reflect the target population. These adjustment procedures could help avoid the time and expense of collecting a completely new training data set from the current target population. We report the results of a simulation study to evaluate the procedures. We applied the methods to a dataset of HIV subtype B infection. The adjustment procedures could be applicable in situations other than cross-sectional incidence estimation where complex statistical analyses are to be conducted using an initial data set but those results may not be directly transportable to a new target population of interest. The approach we have proposed could offer a practical and cost-effective way to apply cross-sectional incidence methods to new target populations as the epidemic evolves.
© 2019 John Wiley & Sons, Ltd.

Entities:  

Keywords:  HIV; adjustment; cross-sectional; incidence

Year:  2019        PMID: 31115081      PMCID: PMC6743486          DOI: 10.1002/sim.8196

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  22 in total

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Journal:  Stat Methods Med Res       Date:  2012-02       Impact factor: 3.021

2.  On the statistical accuracy of biomarker assays for HIV incidence.

Authors:  Ron Brookmeyer
Journal:  J Acquir Immune Defic Syndr       Date:  2010-08       Impact factor: 3.731

Review 3.  Beyond detuning: 10 years of progress and new challenges in the development and application of assays for HIV incidence estimation.

Authors:  Michael P Busch; Christopher D Pilcher; Timothy D Mastro; John Kaldor; Gaby Vercauteren; William Rodriguez; Christine Rousseau; Thomas M Rehle; Alex Welte; Megan D Averill; Jesus M Garcia Calleja
Journal:  AIDS       Date:  2010-11-27       Impact factor: 4.177

4.  The consistency statement in causal inference: a definition or an assumption?

Authors:  Stephen R Cole; Constantine E Frangakis
Journal:  Epidemiology       Date:  2009-01       Impact factor: 4.822

5.  Challenges to HIV prevention--seeking effective measures in the absence of a vaccine.

Authors:  Stephen W Lagakos; Alicia R Gable
Journal:  N Engl J Med       Date:  2008-04-10       Impact factor: 91.245

6.  Determining HIV incidence in populations: moving in the right direction.

Authors:  Timothy D Mastro
Journal:  J Infect Dis       Date:  2012-11-05       Impact factor: 5.226

7.  Confidence intervals for biomarker-based human immunodeficiency virus incidence estimates and differences using prevalent data.

Authors:  Stephen R Cole; Haitao Chu; Ron Brookmeyer
Journal:  Am J Epidemiol       Date:  2006-10-20       Impact factor: 4.897

8.  Global trends in molecular epidemiology of HIV-1 during 2000-2007.

Authors:  Joris Hemelaar; Eleanor Gouws; Peter D Ghys; Saladin Osmanov
Journal:  AIDS       Date:  2011-03-13       Impact factor: 4.177

9.  Estimating the distribution of the window period for recent HIV infections: a comparison of statistical methods.

Authors:  Michael J Sweeting; Daniela De Angelis; John Parry; Barbara Suligoi
Journal:  Stat Med       Date:  2010-12-30       Impact factor: 2.373

10.  Errors in 'BED'-derived estimates of HIV incidence will vary by place, time and age.

Authors:  Timothy B Hallett; Peter Ghys; Till Bärnighausen; Ping Yan; Geoff P Garnett
Journal:  PLoS One       Date:  2009-05-28       Impact factor: 3.240

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  1 in total

1.  Evaluation of the HIV-1 Polymerase Gene Sequence Diversity for Prediction of Recent HIV-1 Infections Using Shannon Entropy Analysis.

Authors:  Paballo Nkone; Shayne Loubser; Thomas C Quinn; Andrew D Redd; Oliver Laeyendecker; Caroline T Tiemessen; Simnikiwe H Mayaphi
Journal:  Viruses       Date:  2022-07-21       Impact factor: 5.818

  1 in total

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