| Literature DB >> 31110473 |
Grzegorz Kreiner1, Aynur Sönmez2, Birgit Liss2,3, Rosanna Parlato2,4.
Abstract
Understanding underlying mechanisms of neurodegenerative diseases is fundamental to develop effective therapeutic intervention. Yet they remain largely elusive, but metabolic, and transcriptional dysregulation are common events. Sirtuin 1 (SIRT1) is a nicotinamide adenine dinucleotide (NAD+)-dependent lysine deacetylase, regulating transcription, and critical for the cellular adaptations to metabolic stress. SIRT1 regulates the transcription of ribosomal RNA (rRNA), connecting the energetic state with cell growth and function. The activity of the transcription initiation factor-IA (TIF-IA) is important for the transcriptional regulation of ribosomal DNA (rDNA) genes in the nucleolus, and is also sensitive to changes in the cellular energetic state. Moreover, TIF-IA is responsive to nutrient-deprivation, neurotrophic stimulation, and oxidative stress. Hence, both SIRT1 and TIF-IA connect changes in cellular stress with transcriptional regulation and metabolic adaptation. Moreover, they finely tune the activity of the transcription factor p53, maintain mitochondrial function, and oxidative stress responses. Here we reviewed and discussed evidence that SIRT1 and TIF-IA are regulated by shared pathways and their activities preserve neuronal homeostasis in response to metabolic stressors. We provide evidence that loss of rDNA transcription due to altered TIF-IA function alters SIRT1 expression and propose a model of interdependent feedback mechanisms. An imbalance of this signaling might be a critical common event in neurodegenerative diseases. In conclusion, we provide a novel perspective for the prediction of the therapeutic benefits of the modulation of SIRT1- and nucleolar-dependent pathways in metabolic and neurodegenerative diseases.Entities:
Keywords: neurodegeneration; neuronal homeostasis; nucleolus; oxidative stress; p53; rRNA; sirtuin
Year: 2019 PMID: 31110473 PMCID: PMC6499230 DOI: 10.3389/fnmol.2019.00106
Source DB: PubMed Journal: Front Mol Neurosci ISSN: 1662-5099 Impact factor: 5.639
FIGURE 1Nucleolar stress affects SIRT1 mRNA and protein expression in the striatum. (A, B) Gene expression profiling analysis showing changes of mRNA expression for the sirtuins present on the microarray chip at two different ages (9 and 13 weeks) in control and mutant mice (TIF-IAD1RCre) characterized by the genetic conditional ablation of TIF-IA in dopaminoceptive neurons. Heat map visualization of the expression profiling analysis of gene sets encoding for sirtuins reveals upregulation of Sirt1 mRNA in TIFIAD1RCre mice at 13 weeks and downregulation of Sirt3 and Sirt7 at the same time point. Each column represents a single mouse. log2-transformed transcript expression was additionally visualized by a graphical summary of fold change relative to the control mice (∗p < 0.05 by unpaired two-tailed t-test). Briefly, total RNA was dissected from striata of control and mutant mice, checked for its integrity (Bioanalyzer 2100, Agilent, United States), assessed for quantity, and reverse transcribed into cDNA used for microarray hybridization (GeneChip Mouse Genome 430A 2.0 array; Affymetrix, United States). Raw array data were normalized, transformed into expression values, and statistically analyzed using a R/Bioconductor software including Benjamini/Hochberg method to assess false discovery rate. Visualization of heat map was performed with MultiExperiment Viewer (MeV version 4.8.1) to show the expression pattern of genes encoding for sirtuins. The data are stored in the GEO database (http://www.ncbi.nlm.nih.gov/geo/, record number GSE29647). (C) Gene expression analysis by qRT-PCR of Sirt1 mRNA in control and TIF-IAD1Cre mice at different ages using the Chromo4 Platform (Bio-Rad, Hercules, CA, United States). Hypoxanthine-phophoribosyltransferase (Hprt) was chosen as a housekeeping gene (Kreiner et al., 2013). TaqMan inventoried gene expression assays were used: Sirt1 (Mm01168521_m1), Hprt (Mm00446968_m1) (Applied Biosystems/Life Technologies, Carlsbad, CA, United States). Expression changes were calculated as a fold change vs. mean of control samples. Significantly increased levels of Sirt1 mRNA in the TIF-IAD1Cre mice at 13 weeks (p = 0.011 by two-way ANOVA and post hoc Sidak’s multiple comparison test); N (control, TIF-IAD1Cre) at 4 weeks: 4, 4; at 9 weeks: 3, 4; at 13 weeks: 3, 3; at 15 weeks: 4, 3. Error bars represent SEM. (D) Representative images of the immunofluorescence staining for the nucleolar protein NPM1 (red, Millipore, MAB4500) and SIRT1 (green, Santa Cruz, SC-15404) in striatal sections of control and TIF-IAD1Cre mice at 6 weeks. Scale bar: 20 μm. (E) Semi-quantitative analysis of the intranuclear SIRT1 signal mean intensity by ImageJ (https://imagej.net/ImageJ) in the nucleus of the TIF-IAD1Cre compared to control mice (p = 0.001 by unpaired two-tailed t-test after Shapiro-Wilk test for normality). N = 4, controls and N = 4, TIF-IAD1Cre mice. Error bars represent SEM.
FIGURE 2Integration of SIRT1 and nucleolar-mediated signaling. The figure schematizes the proposed model to describe the convergence of various signaling pathways on SIRT1 and TIF-IA to control cellular adaptation to cellular stress signals and their integration in a neuronal context. Depicted are the relationships between neurotrophic signaling, SIRT1 and TIF-IA, as well as rDNA transcription. Moreover the impact of both SIRT1, rRNA synthesis, and p53 activity/stability is also summarized under basal conditions, under cellular stress and in the presence of mutant RNAs and proteins (typical of neurodegenerative diseases), and upon induction of nucleolar stress by the conditional ablation of TIF-IA gene (please see text for a detailed description). Nucleolar stress is visualized by the loss of nucleolar integrity. Arrows indicate activation or induction, while blunt lines denote inhibition, and red arrows decreased/increased level/activity. A thinner line describes a decreased activity of the indicated process.