Literature DB >> 31108082

Solution Structure of the Carboxy-Terminal Tandem Repeat Domain of Eukaryotic Elongation Factor 2 Kinase and Its Role in Substrate Recognition.

Andrea Piserchio1, Nathan Will2, David H Giles3, Fatlum Hajredini2, Kevin N Dalby4, Ranajeet Ghose5.   

Abstract

Eukaryotic elongation factor 2 kinase (eEF-2K), an atypical calmodulin-activated protein kinase, regulates translational elongation by phosphorylating its substrate, eukaryotic elongation factor 2 (eEF-2), thereby reducing its affinity for the ribosome. The activation and activity of eEF-2K are critical for survival under energy-deprived conditions and is implicated in a variety of essential physiological processes. Previous biochemical experiments have indicated that the binding site for the substrate eEF-2 is located in the C-terminal domain of eEF-2K, a region predicted to harbor several α-helical repeats. Here, using NMR methodology, we have determined the solution structure of a C-terminal fragment of eEF-2K, eEF-2K562-725 that encodes two α-helical repeats. The structure of eEF-2K562-725 shows signatures characteristic of TPR domains and of their SEL1-like sub-family. Furthermore, using the analyses of NMR spectral perturbations and ITC measurements, we have localized the eEF-2 binding site on eEF-2K562-725. We find that eEF-2K562-725 engages eEF-2 with an affinity comparable to that of the full-length enzyme. Furthermore, eEF-2K562-725 is able to inhibit the phosphorylation of eEF-2 by full-length eEF-2K in trans. Our present studies establish that eEF-2K562-725 encodes the major elements necessary to enable the eEF-2K/eEF-2 interactions.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Keywords:  NMR structure; chemical shift perturbations; translational elongation; α-kinase

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Year:  2019        PMID: 31108082      PMCID: PMC6599559          DOI: 10.1016/j.jmb.2019.05.019

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  70 in total

1.  A novel NMR method for determining the interfaces of large protein-protein complexes.

Authors:  H Takahashi; T Nakanishi; K Kami; Y Arata; I Shimada
Journal:  Nat Struct Biol       Date:  2000-03

2.  Crystal structure of the atypical protein kinase domain of a TRP channel with phosphotransferase activity.

Authors:  H Yamaguchi; M Matsushita; A C Nairn; J Kuriyan
Journal:  Mol Cell       Date:  2001-05       Impact factor: 17.970

3.  Determination of the interface of a large protein complex by transferred cross-saturation measurements.

Authors:  Tamiji Nakanishi; Mayumi Miyazawa; Masayoshi Sakakura; Hiroaki Terasawa; Hideo Takahashi; Ichio Shimada
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

4.  Design of stable alpha-helical arrays from an idealized TPR motif.

Authors:  Ewan R G Main; Yong Xiong; Melanie J Cocco; Luca D'Andrea; Lynne Regan
Journal:  Structure       Date:  2003-05       Impact factor: 5.006

5.  A set of HNCO-based experiments for measurement of residual dipolar couplings in 15N, 13C, (2H)-labeled proteins.

Authors:  P Permi; P R Rosevear; A Annila
Journal:  J Biomol NMR       Date:  2000-05       Impact factor: 2.835

6.  Analysis of the domain structure of elongation factor-2 kinase by mutagenesis.

Authors:  T A Diggle; C K Seehra; S Hase; N T Redpath
Journal:  FEBS Lett       Date:  1999-08-27       Impact factor: 4.124

7.  Mapping the functional domains of elongation factor-2 kinase.

Authors:  K S Pavur; A N Petrov; A G Ryazanov
Journal:  Biochemistry       Date:  2000-10-10       Impact factor: 3.162

8.  Phosphorylation of elongation factor-2 kinase on serine 499 by cAMP-dependent protein kinase induces Ca2+/calmodulin-independent activity.

Authors:  T A Diggle; T Subkhankulova; K S Lilley; N Shikotra; A E Willis; N T Redpath
Journal:  Biochem J       Date:  2001-02-01       Impact factor: 3.857

9.  Activation of AMP-activated protein kinase inhibits protein synthesis associated with hypertrophy in the cardiac myocyte.

Authors:  Anita Y M Chan; Carrie-Lynn M Soltys; Martin E Young; Christopher G Proud; Jason R B Dyck
Journal:  J Biol Chem       Date:  2004-05-24       Impact factor: 5.157

10.  A novel mTOR-regulated phosphorylation site in elongation factor 2 kinase modulates the activity of the kinase and its binding to calmodulin.

Authors:  Gareth J Browne; Christopher G Proud
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

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  3 in total

1.  Discovery of New Inhibitors of eEF2K from Traditional Chinese Medicine Based on In Silico Screening and In Vitro Experimental Validation.

Authors:  Qinghua Fu; Xiaomei Liu; Yan Li; Peng Wang; Tian Wu; Haihan Xiao; Yameng Zhao; Qichao Liao; Ziyi Song
Journal:  Molecules       Date:  2022-07-30       Impact factor: 4.927

2.  Structural basis for the calmodulin-mediated activation of eukaryotic elongation factor 2 kinase.

Authors:  Andrea Piserchio; Eta A Isiorho; Kimberly Long; Amanda L Bohanon; Eric A Kumar; Nathan Will; David Jeruzalmi; Kevin N Dalby; Ranajeet Ghose
Journal:  Sci Adv       Date:  2022-07-06       Impact factor: 14.957

3.  The role of calcium in the interaction between calmodulin and a minimal functional construct of eukaryotic elongation factor 2 kinase.

Authors:  Kwangwoon Lee; Eric A Kumar; Kevin N Dalby; Ranajeet Ghose
Journal:  Protein Sci       Date:  2019-12       Impact factor: 6.725

  3 in total

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