| Literature DB >> 31102497 |
Rogier A Gaiser1, Jaione Ayerra Mangado1, Milena Mechkarska2, Wendy E Kaman3, Peter van Baarlen1, J Michael Conlon2, Jerry M Wells1.
Abstract
Cationic, amphipathic, α-helical host-defense peptides (HDPs) that are naturally secreted by certain species of frogs (Anura) possess potent broad-spectrum antimicrobial activity and show therapeutic potential as alternatives to treat infections by multidrug-resistant pathogens. Fourteen amphibian skin peptides and twelve analogues of temporin-1DRa were studied for their antimicrobial activities against clinically relevant human or animal skin infection-associated pathogens. For comparison, antimicrobial potencies of frog skin peptides against a range of probiotic lactobacilli were determined. We used the VITEK 2 system to define a profile of antibiotic susceptibility for the bacterial panel. The minimal inhibitory concentration (MIC) values of the naturally occurring temporin-1DRa, CPF-AM1, alyteserin-1c, hymenochirin-2B, and hymenochirin-4B for pathogenic bacteria were threefold to ninefold lower than the values for the tested probiotic strains. Similarly, temporin-1DRa and its [Lys4 ], [Lys5 ], and [Aib8 ] analogues showed fivefold to 6.5-fold greater potency against the pathogens. In the case of PGLa-AM1, XT-7, temporin-1DRa and its [D-Lys8 ] and [Aib13 ] analogues, no apoptosis or necrosis was detected in human peripheral blood mononuclear cells at concentrations below or above the MIC. Given the differential activity against commensal bacteria and pathogens, some of these peptides are promising candidates for further development into therapeutics for topical treatment of skin infections.Entities:
Keywords: HDP; antimicrobial peptide; biological screening
Mesh:
Substances:
Year: 2020 PMID: 31102497 PMCID: PMC7891380 DOI: 10.1111/cbdd.13569
Source DB: PubMed Journal: Chem Biol Drug Des ISSN: 1747-0277 Impact factor: 2.817
Bacteria used in this study
| Bacterial species | Strain | Source | |
|---|---|---|---|
| Commensal/probiotic |
| WCFS1 | TIFN |
|
| LGG | Valio | |
|
| DSM20554 | DSMZ | |
|
| FortaFit Ls‐33 | Danisco | |
|
| R0215 | Rossell | |
|
| Shirota | Yakult | |
|
| LC‐1 | Nestle | |
|
| ATCC55730 | BioGaia | |
|
| LA5 | Chr Hansen | |
| Pathogenic/opportunistic |
| S10 3881 | CVI (Vecht et al., |
|
| DMS 20231 | DSMZ | |
|
| Sens 8325.4 | EMC | |
|
| MRSA B33424 | EMC | |
|
| E138 | KU | |
|
| E139 | KU | |
|
| E140 | KU | |
|
| S70E2 | KU | |
|
| S70E8 | KU | |
|
| S70F3 | KU | |
|
| 26228 | KU | |
|
| 25467 | KU | |
|
| Sens1 PA01 | EMC | |
|
| Sens2 ATCC27853 | EMC | |
|
| MDR1 B38084 | EMC | |
|
| MDR2 B31770 | EMC | |
|
| Sens S1 | EMC | |
|
| Sens S2 | EMC | |
|
| VanA R39 | EMC | |
|
| VanB R44 | EMC | |
|
| MDR Bangl 027 | EMC |
The naturally occurring peptides and temporin‐1DRa analogues used in this study and their source species
| Source/Peptide | Length | Amino acid sequence | Net charge | GRAVY | α‐helicity |
|---|---|---|---|---|---|
| 1. | |||||
| 1.1. | |||||
| 1.1.1. | |||||
| Magainin‐AM1 | 23 aa | GIKEFAHSLGKFGKAFVGGILNQ | +2 | +0.2 | Non‐helical |
| PGLa‐AM1 | 22 aa | GMASKAGSVLGKVAKVALKAAL.NH2 | +4 | +0.83 | 9–22 |
| CPF‐AM1 | 17 aa | GLGSVLGKALKIGANLL.NH2 | +2 | +1.03 | 5–14 |
| 1.1.2. | |||||
| PGLa‐LM1 | 21 aa | GMASKAGSVAGKIAKFALGAL.NH2 | +4 | +0.805 | 9–18 |
| 1.2. | |||||
| 1.2.1. | |||||
| XT‐7 (CPF‐ST3) | 18 aa | GLLGPLLKIAAKVGSNLL.NH2 | +2 | +1.12 | 5–13 |
| 1.3. | |||||
| 1.3.1. | |||||
| Hymenochirin‐1B | 29 aa | IKLSPETKDNLKKVLKGAIKGAIAVAKMV.NH2 | +6 | +0.169 | 5–27 |
| Hymenochirin‐2B | 29 aa | LKIPGFVKDTLKKVAKGIFSAVAGAMTPS | +4 | +0.466 | 8–16 |
| Hymenochirin‐4B | 28 aa | IKIPAFVKDTLKKVAKGVISAVAGALTQ | +4 | +0.664 | 7–16 |
| 2. | |||||
| 2.1. | |||||
| 2.1.1. | |||||
| Alyteserin‐1c | 23 aa | GLKEIFKAGLGSLVKGIAAHVAS.NH2 | +3 | +0.748 | 2–8; 10–21 |
| Alyteserin‐2a | 16 aa | ILGKLLSTAAGLLSNL.NH2 | +2 | +1.275 | 9–14 |
| 3. | |||||
| 3.1. | |||||
| 3.1.1. | |||||
| Temporin‐1DRa | 14 aa | HFLGTLVNLAKKIL.NH2 | +3 | +0.879 | 5–14 |
| [Lys4]temporin‐1DRa | HFL | +4 | nd | 4–14 | |
| [Lys5]temporin‐1DRa | HFLG | +4 | nd | 4–14 | |
| [D‐Lys4]temporin‐1DRa | HFL | +4 | nd | nd | |
| [D‐Lys5]temporin‐1DRa | HFLG | +4 | nd | nd | |
| [D‐Lys8]temporin‐1DRa | HFLGTLV | +4 | nd | nd | |
| [Aib8]temporin‐1DRa | HFLGTLV | +4 | nd | 5–14 | |
| [Aib9]temporin‐1DRa | HFLGTLVN | +4 | nd | 5–14 | |
| [Aib10]temporin‐1DRa | HFLGTLVNL | +4 | nd | 5–14 | |
| [Aib13]temporin‐1DRa | HFLGTLVNLAKK | +4 | nd | 5–14 | |
| [Orn7]temporin‐1DRa | HFLGTL | +4 | nd | nd | |
| [DAB7] temporin‐1DRa | HFLGTL | +4 | nd | nd | |
| [TML7] temporin‐1DRa | HFLGTL | +4 | nd | nd | |
| 3.1.2. | |||||
| Brevinin‐1BYa | 24 aa | FLPILASLAAKFGPKLFCLVTKKC | +4 | +1.07 | 4–12 |
| 3.2. | |||||
| 3.2.1. | |||||
| B2RP‐Era | 19 aa | GVIKSVLKGVAKTVALGML.NH2 | +3 | +1.25 | 13–16 weak |
| 4. | |||||
| 4.1. | |||||
| 4.1.1 | |||||
| Pseudin‐2 | 24 aa | GLNALKKVFQGIHEAIKLINNHVQ.NH2 | +3 | −0.008 | 2–19; 14–19 |
PGLa‐LM1 was found in a hybrid frog of X. laevis and X. muelleri (1.1.2) (Mechkarska, Meetani et al., 2012). Single amino acid residue substitutions are marked in bold font. The net charge is calculated at pH 7.0. The grand average of hydropathy (GRAVY) is defined as the sum of all hydropathy values divided by the length of the sequence (Kyte & Doolittle, 1982). AGADIR (Munoz & Serrano, 1994) was used to predict which residues of the peptide are in an α‐helical confirmation. Aib, α‐aminoisobutyric acid; Orn, ornithine; DAB, diaminobutyric acid; TML, trimethyllysine; nd, not determined.
Antibiotic resistance profile for bacteria used in this study, as determined by the VITEK®2 system
|
|
Multiple antibiotics cards were used, differing in antibiotics depending on the target species. Profiles for those lactobacilli requiring anaerobic culture conditions were not obtained. Resistance phenotype per antibiotic was scored as sensitive (green), intermediate (orange), or resistant (red) according to the EUCAST species‐specific breakoff points based on MIC values (EUCAST, 2014). A summary of antibiotic resistance for each strain is provided in the second column, shaded from resistance to no resistance (dark blue) to resistance to 16 antibiotics (dark red). See Table S1 for an overview of mode of actions of each antibiotic. nd, not determined.
Figure 1(a) Minimal inhibitory concentration (MIC) values of a selection of naturally occurring frog skin peptides against nine Gram‐positive lactic acid bacteria (green) and 13 Gram‐positive pathogenic bacteria (orange). The fold difference in MIC between the two groups is depicted as purple bars on the secondary axis. Average values ± SEM are shown. (b) Heatmap representation of all MIC values of the tested frog skin peptides, including for each peptide its net charge at pH 7 and grand average of hydropathy (GRAVY). The gray color indicates MIC was not determined
Figure 2(a) Minimal inhibitory concentration (MIC) values of temporin‐1DRa analogues against 9 Gram‐positive lactic acid bacteria (green) and 13 Gram‐positive pathogenic bacteria (orange). The fold difference in MIC between the two bacterial groups is depicted as purple bars on the secondary axis. Average values ± SEM are shown. (b) Heatmap representing the MIC values of temporin‐1DRa analogues against the panel of tested bacteria. The gray color indicates MIC was not determined
Figure 3Human PBMCs obtained from three healthy donors were exposed to 100, 10, or 1 μg/ml of PGLa‐AM1, XT‐7, temporin‐1DRa, [D‐Lys8]temporin‐1DRa, and [Aib13]temporin‐1Dra for 24 hr, stained with Annexin V and PI and apoptotic or dead cells quantified by flow cytometry. Iscove's Modified Dulbecco's Medium (IMDM) was used as a negative control, and bacterial lipopolysaccharide (LPS) was used as a positive control. Proportions of live (blue), early‐apoptotic (red), late‐apoptotic (green), and dead (purple) cells are displayed. Error bars depict SD of live cells between averaged values of all three donors