Literature DB >> 31093977

Expression analysis of circulating plasma long noncoding RNAs in colorectal cancer: The relevance of lncRNAs ATB and CCAT1 as potential clinical hallmarks.

Paria Abedini1, Azam Fattahi2, Shahram Agah3, Atefeh Talebi3, Amir Hossein Beygi4, Seyed Mohammad Amini5, Alireza Mirzaei6, Abolfazl Akbari3.   

Abstract

Long noncoding RNAs (lncRNAs) have been demonstrated to regulate a variety of cell processes and involve in the development and progression of colorectal cancer (CRC). Recently, the circulating lncRNAs have emerged as minimally invasive biomarkers for cancer diagnosis and prognosis. We aimed to examine the plasma expression level of long noncoding RNAs lnc-ATB, lnc-CCAT1, and lnc-OCC-1 in CRC patients and evaluate the clinical values. A total of 74 pretreatment CRC and 74 healthy blood biopsies were subjected to differentially evaluate the expression levels of three lncRNAs (OCC-1, CCAT1, and ATB). Briefly, after plasma separation and total RNA extraction, RNAs were reversely transcribed to complementary DNA followed by amplification using a quantitative real-time polymerase chain reaction technique for lncRNA expression analysis. The results showed that the expression levels of lnc-ATB (p < 0.001) and CCAT1 (p = 0.024), but not OCC-1 (p = 0.24), were significantly upregulated in the CRC compared with the healthy group. The calculated AUC of ROC was 0.78 (95% confidence interval [CI]: 0.811-0.94) for lnc-ATB and 0.64 (95% CI: 0.811-0.94) for CCAT1, which were indicative of a high discriminatory power (p < 0.001). The highest accuracy for lncRNA-ATB was obtained at a cutoff point of 2.5, which corresponded to sensitivity and specificity of 82% and 75%, respectively. Our results suggested a significant accuracy of lncRNA-ATB and lncRNA-CCAT1 in distinguishing CRC patients from healthy individuals.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  ATB; CCAT1; OCC-1; colorectal cancer; long noncoding RNA; plasma

Mesh:

Substances:

Year:  2019        PMID: 31093977     DOI: 10.1002/jcp.28765

Source DB:  PubMed          Journal:  J Cell Physiol        ISSN: 0021-9541            Impact factor:   6.384


  17 in total

Review 1.  The function of LncRNA-ATB in cancer.

Authors:  Amir Anbiyaiee; Mohammad Ramazii; Siamak Soltani Bajestani; Seyed Mohammadmahdi Meybodi; Mona Keivan; Seyed Esmaeil Khoshnam; Maryam Farzaneh
Journal:  Clin Transl Oncol       Date:  2022-05-21       Impact factor: 3.405

Review 2.  Noncoding RNAs in Extracellular Fluids as Cancer Biomarkers: The New Frontier of Liquid Biopsies.

Authors:  Barbara Pardini; Alexandru Anton Sabo; Giovanni Birolo; George Adrian Calin
Journal:  Cancers (Basel)       Date:  2019-08-14       Impact factor: 6.639

Review 3.  Biomarkers for detecting colorectal cancer non-invasively: DNA, RNA or proteins?

Authors:  Alexandre Loktionov
Journal:  World J Gastrointest Oncol       Date:  2020-02-15

4.  Expression profile analysis of two antisense lncRNAs to improve prognosis prediction of colorectal adenocarcinoma.

Authors:  Milad Shademan; Azam Naseri Salanghuch; Khadijeh Zare; Morteza Zahedi; Mohammad Ali Foroughi; Kambiz Akhavan Rezayat; Hooman Mosannen Mozaffari; Kamran Ghaffarzadegan; Ladan Goshayeshi; Hesam Dehghani
Journal:  Cancer Cell Int       Date:  2019-11-06       Impact factor: 5.722

5.  Exosomal Long Non-coding RNA HOTTIP Increases Resistance of Colorectal Cancer Cells to Mitomycin via Impairing MiR-214-Mediated Degradation of KPNA3.

Authors:  Xijuan Chen; Yingqiang Liu; Qinglan Zhang; Baoxing Liu; Yan Cheng; Yonglei Zhang; Yanan Sun; Junqi Liu; Hong Gen
Journal:  Front Cell Dev Biol       Date:  2021-01-28

6.  Long non-coding RNA receptor activator of nuclear factor-κ B ligand promotes cisplatin resistance in non-small cell lung cancer cells.

Authors:  Zhongcheng Zhu; Xiaoyi Gong; Jing Li; Yufeng Shi; Mingyun Zhang
Journal:  Exp Ther Med       Date:  2021-03-22       Impact factor: 2.447

7.  Clinical value of lncRNA CCAT1 in serum extracellular vesicles as a potential biomarker for gastric cancer.

Authors:  Ke Xiao; Zhaogang Dong; Ding Wang; Min Liu; Juan Ding; Wendan Chen; Ziqi Shang; Congbo Yue; Yi Zhang
Journal:  Oncol Lett       Date:  2021-04-06       Impact factor: 2.967

8.  Construction of ceRNA Coexpression Network and Screening of Molecular Targets in Colorectal Cancer.

Authors:  Zhao Hui; Wang Zhanwei; Yang Xi; Liu Jin; Zhuang Jing; Han Shuwen
Journal:  Dis Markers       Date:  2020-04-21       Impact factor: 3.434

Review 9.  Microsatellite Instability in Colorectal Cancer Liquid Biopsy-Current Updates on Its Potential in Non-Invasive Detection, Prognosis and as a Predictive Marker.

Authors:  Francis Yew Fu Tieng; Nadiah Abu; Learn-Han Lee; Nurul-Syakima Ab Mutalib
Journal:  Diagnostics (Basel)       Date:  2021-03-18

Review 10.  Novel Diagnostic Biomarkers in Colorectal Cancer.

Authors:  Aneta L Zygulska; Piotr Pierzchalski
Journal:  Int J Mol Sci       Date:  2022-01-13       Impact factor: 5.923

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