Joaquim Jornet-Somoza1,2, Irina Lebedeva1. 1. Nano-Bio Spectroscopy Group and ETSF Scientific Development Centre, Department of Materials Physics , University of the Basque Country, CFM CSIC-UPV/EHU-MPC and DIPC , Tolosa Hiribidea 72 , E-20018 Donostia-San Sebastián , Spain. 2. Theory Department , Max Planck Institute for the Structure and Dynamics of Matter and Center for Free-Electron Laser Science , Luruper Chaussee 149 , 22761 Hamburg , Germany.
Abstract
Photoactive systems are characterized by their capacity to absorb the energy of light and transform it. Usually, more than one chromophore is involved in the light absorption and excitation transport processes in complex systems. Linear-Response Time-Dependent Density Functional (LR-TDDFT) is commonly used to identify excitation energies and transition properties by solving the well-known Casida's equation for single molecules. However, in practice, LR-TDDFT presents some disadvantages when dealing with multichromophore systems due to the increasing size of the electron-hole pairwise basis required for accurate evaluation of the absorption spectrum. In this work, we extend our local density decomposition method that enables us to disentangle individual contributions into the absorption spectrum to computation of exciton dynamic properties, such as exciton coupling parameters. We derive an analytical expression for the transition density from Real-Time Propagation TDDFT (P-TDDFT) based on Linear Response theorems. We demonstrate the validity of our method to determine transition dipole moments, transition densities, and exciton coupling for systems of increasing complexity. We start from the isolated benzaldehyde molecule, perform a distance analysis for π-stacked dimers, and finally map the exciton coupling for a 14 benzaldehyde cluster.
Photoactive systems are characterized by their capacity to absorb the energy of light and transform it. Usually, more than one chromophore is involved in the light absorption and excitation transport processes in complex systems. Linear-Response Time-Dependent Density Functional (LR-TDDFT) is commonly used to identify excitation energies and transition properties by solving the well-known Casida's equation for single molecules. However, in practice, LR-TDDFT presents some disadvantages when dealing with multichromophore systems due to the increasing size of the electron-hole pairwise basis required for accurate evaluation of the absorption spectrum. In this work, we extend our local density decomposition method that enables us to disentangle individual contributions into the absorption spectrum to computation of exciton dynamic properties, such as exciton coupling parameters. We derive an analytical expression for the transition density from Real-Time Propagation TDDFT (P-TDDFT) based on Linear Response theorems. We demonstrate the validity of our method to determine transition dipole moments, transition densities, and exciton coupling for systems of increasing complexity. We start from the isolated benzaldehyde molecule, perform a distance analysis for π-stacked dimers, and finally map the exciton coupling for a 14 benzaldehyde cluster.
In
the last decades, the interest in using natural sun light for
an energy transition toward green and clean energy sources has increased.
Researchers have focused their investigations on the design of new
devices to harvest and use this absorbed light.[1,2] The
challenge is to create new light-harvesting complexes that can transfer
the light energy to a desired reaction center,[3] such as natural light-harvesting complexes (LHC),[4−7] or to design new emitters[8,9] for light and flexible organic light emitting diodes (OLEDs)[10−12] with the quantum efficiency close to unity. Such a quantum efficiency
means that all the light energy is transferred to the reaction center
for the former or that all input energy is emitted in the form of
light without dissipation in OLEDs.These molecular systems
usually contain a large number of chromophores,
i.e., molecules that can absorb a photon in the UV–visible
region. Their capacity of absorbing and transferring the corresponding
energy are the key factors that determine the efficiency of the system.From the theoretical point of view, characterization of excited
states can be done addressing the eigenvalue problem either by solving
the Schrödinger equation using a multiconfigurational ansatz[13] or the single-particle Kohn–Sham equations
in the time-dependent formalism of the density functional theory (TDDFT).[14,15] An excited state is characterized by its transition dipole moment
and the corresponding transition density. The former gives the information
about the probability of exciting an electron from the ground state
and the most efficient polarization direction of the light, while
the transition density informs us about the change of the electronic
density from the ground state to the excited state. Both of these
properties are extremely sensitive to the polarization induced by
the environment, and the spectroscopic fingerprint of the isolated
molecule in vacuum is usually not sufficient even for a qualitative
description.[16,17]The common way to obtain
the transition dipole moment for a given
excitation in the TDDFT framework is to solve the linear-response
Casida’s equation.[18] For that, one
needs to compute the ground state Kohn–Sham (KS) wave function.
In addition, this procedure requires a large number of well converged
unoccupied (or virtual) KS states in order to have a good representation
of the electron–hole pair transition space. Nevertheless, this
procedure has two main drawbacks: (i) Large molecules/complex systems
require a large set of KS orbitals which makes the solution of the
Casida’s equation unfeasible. (ii) High energy excitations
are usually not properly described due to the lack of well converged
high energy virtual KS orbitals.Several approaches have been
developed to reduce the number of
electron–hole pair transitions needed to solve the Casida’s
equation (e.g., subsystems TDDFT,[19] simplified
Tamm-Dancoff density functional approach,[20] simplified TDDFT,[21] tight-binding approaches
to TDDFT (TD-DFTB,[22] TD-DFT+TB[23]), but they make some approximation on the environment
interaction and keep failing for high energy excitations. On the other
hand, Real-Time Propagation TDDFT (P-TDDFT) provides an efficient
alternative to these methods. It has been demonstrated that P-TDDFT
is an excellent platform for studies of such properties and processes
such as molecular[24] and electron[25] dynamics, linear and nonlinear optics,[26] transport properties,[27] single and triplet excitations,[28,29] dynamical
hyperpolarizabilites,[30] and exciton decay
dynamics.[31] But probably, the most useful
advantage that P-TDDFT offers is the possibility to obtain all frequency
excitations at the same cost having converged just the occupied KS
states for the ground state.[32,33] Also, propagation of
the KS states can be highly parallelized enabling us to compute optical
properties for up to several thousands of atoms.[34,35]These features make P-TDDFT the suitable theoretical framework
to study photoactive complex systems such as natural LHC and OLEDS.
In such cases, it is important to take into account the environment
effects, which is commonly done by adding polarizable force fields[36] or by other methods.[16]It is well known that the absorption cross section can be
computed
from the propagation of the KS states in the linear-response regime.
Also, the transition densities and plasmons can be qualitatively evaluated
from the Fourier transform of the time-dependent induced density.[37−40] Recently Schelter et at.[41] provided an
analytical form to obtain the oscillator strengths, excitation energies,
and transition densities from the real-time propagation of the electron
system. They used the many-body ground state Hamiltonian to show that
a quantum mechanical solution for the response functions after a boost
excitation have the cardinal sine form, and they exemplified their
method by performing real-time propagation TDDFT calculations. In
that paper, however, they did not address how transition densities
can be extracted for randomly oriented distorted chromophores in complex
systems.In this work, we provide another derivation using the
linear-response
formalism, which makes it possible to study exciton couplings of arbitrary
complex systems. We present a theoretical description of bright excitations
by performing P-TDDFT that can be applicable even to very large systems,
all treated entirely at the same atomistic level of theory. Combining
the local density analysis we recently introduced[34] and our new derivation described below, the
individual transition dipole moments and transition densities are
obtained from P-TDDFT. The techniques we propose here permit us to
compute not just the first excitation but a broad energy range of
excited states of molecules taking into account all effects induced
by the rest of the system. This methodology provides a powerful tool
to study exciton dynamics in light-harvesting complexes[42] and light-emitting layers of OLEDs.[43]As a proof of concept of the method here
presented, we illustrate
its validity for the cases of increasing complexity including the
benzaldehyde molecule, dimer, and a cluster of 14 molecules. In the
following, we first describe the methodology developed and then discuss
the results for the systems listed.
Theoretical
Development
In this section, we first describe the fundamentals
of computation
of absorption spectra for finite systems from real-time propagation
TDDFT (P-TDDFT). Then, we expose our time-dependent local-density
analysis that enables us to decompose the absorption spectra into
individual contributions.In the next subsection, we derive
analytical expressions for the
transition moment and transition densities for a given excitation
from P-TDDFT in the linear-response regime.In the third subsection,
both techniques are combined in order
to study exciton transfer in multichromophore systems taking into
account the actual environment, treated entirely at the same level
of theory, i.e., TDDFT.
Absorption Spectra Decomposition
In the dipole approximation, the influence of the electric field
applied to a quantum system can be supervised by the time evolution
of the dipole momentwhere t0 is the
initial time just before the application of the time-dependent external
field, (t), and the dynamic polarizability
element, α(t–t′), is the retarded response
that relates the λ component of the external electric field
to the change of the ν component of the dipole moment of the
system.In the linear-response theory, the dynamic polarizability
tensor is constructed from the general expression for the retarded
response function[15]where the
dipole moment operator and the external
potential are described as μ̂ν = er̂ν and vλ(t) = r̂λ(t), respectively (where e refers to the
electron charge), Θ(t – t′) is the Heaviside function,
and |Ψ0⟩ is the wave function at the initial
moment of time (t0).The polarizability
tensor α(ω) can be
obtained by propagation of the KS states after the application of
a perturbative boost. Usually, for finite systems, this external pertubative
potential is applied in the form of a delta-pulse of the electric
field[14,15]where k corresponds to the magnitude
vector of the electric field, which should be sufficiently small to
ensure the linear-response regime.Then, the polarizability
tensor can be written in frequency space
(ω) in terms of the Fourier transform of the time-dependent
dipole moment asNote that if k is sufficiently small so that the system
is in the linear-response regime, the polarizability tensor does not
depend on it.In the time-dependent Kohn–Sham scheme,
the time-dependent
dipole moments can be easily obtained from the time-dependent electronic
density (ρ(,t)))wherewhere
Φ(,t) are the KS orbitals
and the summation runs over the Nocc occupied
orbitals.At the same time, by describing the dynamic polarizability
tensor
in the Lehmann’s representation and using the “fluctuation–dissipation”
theorem,[15] the imaginary part of the dynamic
polarizability tensor can be related with the oscillator strength
of each transition, in atomic units, aswhere the |Ψ⟩ is the wave function of the nth excited
state, Ω is the corresponding excitation
energy, and f is the
oscillator strength which gives the transition probability for that
particular excitation. This expression relates directly the dynamic
polarization tensor (α(ω)) and the transition
dipole moment ().In addition, from the imaginary part of the dynamic polarizability
tensor, we can obtain the photoabsorption cross section, which is
gives the absorption spectrum of the systemwhere c is the speed of light
and is the dipole spectral function.
Local Density Analysis for Spectrum Decomposition
The
first time we introduced this methodology was in the decomposition
of theoretical spectra of the major light-harvesting complex II (LHCII).[34] This procedure is based on the DFT fundamentals,
in particular, on the DFT theorem exposed by Hohenberg and Kohn, that
establish the electron density as a basic variable from which any
observable property of a quantum system can be calculated.[44] Then, we can define the local observable property
by splitting the total electronic density into the contributions for
different subsystems. This partitioning is performed using the quantum
theory of atoms in molecules (QTAIM) introduced by Bader.[45] Among other topological properties, QTAIM enables
us to assign different regions of space to specific atoms by following
the gradient of the electron density.Therefore, we can decompose
our total electron density into the sum of electron densities which
belong to different molecules forming the complex system of interest.
Using this approach, we can determine the local time-dependent density
for each chromophore and compute its contribution to the photoabsorption
spectrum by applying eqs –8.It is important to remark
that, since we stay in the linear-response
regime, the boost on the initial wave function does not produce a
significant change in the electron density distribution. Instead,
just small fluctuations are observed. For this reason, partitioning
of the ground state density is enough to define individual molecular
space regions and to study the time evolution of the electron density
inside these domains.
Transition Dipole Moments
and Transition Densities
from P-TDDFT
In order to properly characterize electronic
transitions, it is worth obtaining transition dipole moments, and transition densities, ρ() = ⟨Ψ|n̂()|Ψ0⟩, where is
the position operator and n̂() the density operator. From eqs –7, we can see
that transition dipole moments are related with
the imaginary parts of Fourier transforms of time-dependent dipole
moments. Analogously, in P-TDDFT, transition densities are related
with the imaginary parts of Fourier transforms of induced time-dependent
densities.[37−39,46]Recently, Schelter
et at.[41] derived an analytic expression
to compute transition dipole moments and transition densities from
P-TDDFT calculations, based on the coefficient expansion of the time-dependent
wave function in terms of eigenfunctions of the many-body ground-state
Hamiltonian.In this work, we present a complementary derivation
of both properties
based only in LR-TDDFT arguments. Let us start with the key object
in the linear-response TDDFT, which is the definition of the response
density aswhere χ is the density–density
response function[14]The density operator here is defined in second quantization
as n̂ = â†â, and the subindex H0 stands for the zero-order Hamiltonian, i.e.,
with no external perturbation.In the frequency space, this
gives the well-known “Lehmann
representation”From this expression,
we can see that the information regarding
all transition densities for excitations from the ground state (Ψ0) to any excited state (Ψ) is kept in the density–density response function, since
the transition density is defined by ρ() = ⟨Ψ|n̂()|Ψ0⟩.We can now make use of the “fluctuation–dissipation
theorem”[15] that relates the density–density
response function (χ) with the
corresponding dynamical structure factor (S) at zero temperatureSince we
assume T = 0 K, the dynamical structure
factor fulfills S(ω)
= 0 for ω < 0 and S(−ω) = 0 for ω > 0. Then, we do not consider stimulated emission and focus on the absorption spectrum
(i.e., consider just ω > 0). By insterting eq into eq , where the system is perturbed by an instantaneous
electric field, and using eq , we obtain the following equationTaking into account that each component
of the transition moment
of a given excitation can be computed from the corresponding transition
density (i.e., μ = ∫ rνρ()d), one getswhere k is the magnitude
of the external electric field (eq ), and μ corresponds to the projection of the transition dipole moment
(0 → n, n excited state)
over the polarization direction of the electric field.Then,
the imaginary part of the response density can be expressed
in terms of all transition densities scaled by the projection of the
corresponding transition moment on the direction of the external fieldIf we are interested in the excited
states that are energetically
far one from each other, the transition densities can be recovered
from the response densities under an active perturbation, i.e., the
one for which the transition is dipole allowed and μ ≠ 0
Finite Propagation Times in P-TDDFT
As stated in eq ,
we first need to know the transition moment for a given excitation
in order to recover the transition density.To obtain the photoabsorption
spectrum from finite propagation times in P-TDDFT, a damping function
is commonly added in the Fourier transform of the polarizability tensor
determined by eq (Supporting Information). It induces an artificial
decay of the excited population and allows us to get a smooth spectrum
removing artificial peaks. In particular, in our calculations, we
introduce a Gaussian damping function (e–η). We set the parameter
η such that the damping function reaches the value of 1e–4 at the end of the propagation time
τThe damping parameter is responsible for the spectral broadening
(Supporting Information) so that each single
excitation is represented by a Gaussian function with half-width at
half-maxima (σhwhm)Transition dipole moments
can be obtained from a P-TDDFT calculation
by diagonalization of the dynamic polarizability tensor given by eq . The frequency-dependent
diagonal elements of the diagonalized polarizability tensor give the
information about the probability of orthogonal excitations (i.e.,
transitions characterized by orthogonal transition dipoles) and enables
us to distinguish between quasidegenerate states.The area under
the trace of the diagonalized dynamic polarizability
tensor is proportional to the square of the transition dipole moment
(eq ), and the direction
of the transition dipole moment is determined by the corresponding
eigenvectors.In order to obtain the magnitudes of the transition
dipole moments,
we fit the spectra generated from the diagonalized frequency-dependent
dynamic polarizability tensor by a sum of Gaussian functions. The
Gaussian fit is obtained using the methodology described by Goshtasby
et al.[47] Then, the broadening of the Fourier
transform and the location of the excitation energies are found from
the fitted parameters of the Gaussian half-width at half-maxima (σ) and the Gaussian center, respectively (ϵ).Knowing the transition dipole moments
and broadening introduced
due to the damping function, transition densities can be computed
from P-TDDFT on finite times by taking the imaginary part of the Fourier
transform of the time-dependent response density applying the same
Gaussian damping. Then, integrating eq around the peak at Ω, we obtain the analytical expression for the transition densitywhere σ is precisely the Gaussian
fitted half-width at half-maxima around
Ω.
Exciton
Coupling Evaluation
Both
techniques, the local density analysis and calculation of transition
densities from P-TDDFT, can be combined in order to study complex
systems containing more than one photoactive molecule.The exciton
dynamics is governed by the exciton coupling determined by the Frenkel
Exciton Hamiltonianwhere |n⟩ is the excited
state located on the site n, ϵ are the site energies (or vertical excitation energies),
and V corresponds to
the exciton coupling between excited states on the
donor site n, and the acceptor site m. The exciton coupling is determined by the interaction
between the transition densities[48,49]where g is the exchange-correlation kernel, and ω is the resonant excitation
energy
for states n and m for symmetric
systems; otherwise, the average of the acceptor (ω) and donor (ω) excitation frequencies is used. Note that this expression was derived
considering the interaction between chromophores as a perturbation.
It is not accurate when the chromophores are so close that their electronic
wave functions strongly interact, mostly due to neglect of the charge-transfer
effects.The Coulombic term inside the kernel function is usually
attributed
to the Förster resonant energy transfer (FRET).[50] This term stands for the interchange of the
exciton population between two sites where the fluorescent energy
of the donor is absorbed by the acceptor producing a resonant excitation.
The second term in the kernel function corresponds to the exchange-correlation
effect and is related the Dexter electron transfer.[51] In this mechanism, the orbital proximity enables the simultaneous
interchange of (i) an excited electron from the donor to an unoccupied
orbital of the acceptor and (ii) an electron from highest occupied
molecular orbital (HOMO) of the acceptor to a hole on low lying single
occupied molecular orbital (SOMO) of the excited donor (Figure ).
Figure 1
Schematic representation
of the excitation energy transfer for
(a) Förster and (b) Dexter mechanisms.
Schematic representation
of the excitation energy transfer for
(a) Förster and (b) Dexter mechanisms.There are several ways to compute the exciton coupling between two excited states of different sites. The most commonly
used ones are the ideal dipole approximation (IDA)[52] and the transition density cube (TDC) method.[53] The former assumes that
both, acceptor and donor molecules, are far enough with no overlap
of the electronic density, and then, the Coulomb interaction can be
written in terms of the point dipole approximation aswith the orientation factor
κ = · – 3(·)(·), where are the unit vectors
describing directions of transition
dipole moments for the donor (D) and acceptor (A), is the distance vector connecting both centers of mass, and is the unit
vector along the same direction.This approximation does not
take into account the delocalization
of the transition densities over the molecules. In other words, different
regions of the electronic density of the acceptor molecule feel different
potentials generated by the excited density of the donor molecule
due to the spacial arrangement.The use of the IDA approximation
requires the knowledge of the
transition dipole moments both for donor and acceptor molecules. In Section , we compare exciton
couplings computed using different transition dipole moments obtained
(i) from consideration of isolated molecules, named here as V(IM)
(where IM stands for isolated molecule) and (ii) from the proposed local density analysis, V(LDT) (where LDT stands for local
density treatment, not to be confused with the LDA exchange-correlation
functional).In the TDC method, the transition densities are
discretized into
small volume units, and then, the exciton coupling is computed through
the following sum over the volume unitsThe TDC method can therefore
include both Coulomb and exchange-correlation
contributions to the exciton coupling (eq ) by evaluating the Coulomb and exchange-correlation
potentials generated by the donor molecule in the region embracing
the acceptor molecule. The exciton coupling obtained using the TDC
method with the local transition densities calculated within our P-TDDFT
formalism is hereafter denoted as V(TDCM).
Procedure and Computational Details
Summarizing, local
transition densities for a complex multichromophore
system can be obtained following the computational steps shown in Figure . After preforming
a ground state (GS) calculation, the local domains are determined
to get the densities belonging to each molecule. We have checked that
since we stay in a linear-response regime during the time-dependent
(td) propagation the electronic charge inside each
domain does not vary significantly (less than 0.005%, Figure S1); hence, there is no need to update
the grid point assignment to different spatial domains during the
time-propagation calculations. Three P-TDDFT calculations are executed
by perturbing the initial state with an electric field polarized in
each of the Cartesian directions, recording the dipole moments and
saving the time-dependent density every 20 steps of the propagation.
Then, the dynamic polarizability tensor for each domain is obtained
and diagonalized to get the local contribution to the absorption spectrum
as well as the transition dipole moments. The frequency-dependent
response densities are obtained by the Fourier transform of the stored
time-dependent electron density. Finally the transition densities
for each molecule and excitation can be reconstructed, and the exciton
coupling can be computed using the TDC method.
Figure 2
Scheme of the procedure
used to get transition dipole moments and
transition densities from P-TDDFT calculations for multichromophore
systems.
Scheme of the procedure
used to get transition dipole moments and
transition densities from P-TDDFT calculations for multichromophore
systems.OCTOPUS is a quantum chemistry/physics
code specially designed
to solve ground-state and time-dependent (TD) DFT problems.[54−56] In OCTOPUS, the basic quantities (Hamiltonian, potentials and single-particle
wave functions) are considered on a discretized real-space grid. Also,
OCTOPUS is highly parallelized in both grid points and Kohn–Sham
states, which enables fast evaluation of nonlinear propagation equations
for the initial Slater determinant during real-time electron dynamics.
These features make OCTOPUS the perfect code to implement our derivation
of transition densities and exciton couplings from P-TDDFT.In this work, we also use the ORCA package that allows us efficient
computation of excited state properties by solving the Casida’s
equation using atom localized basis sets.[57,58] The ORCA package uses several approaches to reduce the computational
cost providing a good compromise against the accuracy of the results,
e.g., the resolution of the identity (RI) approximation for the Coulomb
potential.[59]In order to be sure
that both types of calculations (using ORCA
and OCTOPUS) are consistent, we compared the ground-state eigenvalues
(Table S1) and excited-state energies (Table ). It can be seen
that in all cases the energy difference between the methods is smaller
than 0.05 eV.
Table 1
Excitation Energies (ϵ, in eV), Components of the Transition Dipole Moment
(μ, μ, μ, in Å), and Oscillator
Strength (f) for the
Lowest Bright Excited States of the Isolated Benzaldehyde Molecule
Determined by Gaussian fitting of the First Eigenvalue of the Diagonalized
Polarizability Tensor
Method
ϵn
μx
μy
μz
fn
P-TDDFT
4.21
0.1972
0.0055
0.0439
0.0150
LR-TDDFT
4.23
0.1982
0.0042
0.0440
0.0152
P-TDDFT
4.78
–0.0091
–0.7153
0.0914
0.2175
LR-TDDFT
4.80
–0.0085
–0.7178
0.0915
0.2200
Further computational details of the geometry optimization,
ground-state
calculations, and TDDFT calculations using linear-response and time-propagation
schemes are described in the Supporting Information. The calculated numerical data that support our study are available
in the “NOMAD repository” (http://dx.doi.org/10.17172/NOMAD/2019.02.27-2).
Applications and Discussion
Isolated
Molecule
Let us exemplify
the applicability of the formalism described above by computing the
excitation properties for a single benzaldehyde molecule (Figure a). Figure b shows the benzaldehyde UV–visible
absorption spectrum computed solving the Casida’s equation
within linear-response TDDFT.[18] It presents
two major optically allowed excitations at 4.2 and 4.8 eV.
Figure 3
(a) Benzaldehyde
molecule orientation. Brown, white, and red spheres
represent carbon, hydrogen, and oxigen atoms, respectively. (b) Absorption
spectrum of the isolated benzaldehyde molecule computed using P-TDDFT
(purple line) and LR-TDDFT (yellow impulses). The decomposition of
P-TDDFT results in the contributions from different eigenvalues of
the diagonalized polarizability tensor indicated using green, blue,
and orange lines.
(a) Benzaldehyde
molecule orientation. Brown, white, and red spheres
represent carbon, hydrogen, and oxigen atoms, respectively. (b) Absorption
spectrum of the isolated benzaldehyde molecule computed using P-TDDFT
(purple line) and LR-TDDFT (yellow impulses). The decomposition of
P-TDDFT results in the contributions from different eigenvalues of
the diagonalized polarizability tensor indicated using green, blue,
and orange lines.Figure b also shows
how the absorption spectra obtained from the trace of the dynamic
polarizability tensor can be decomposed by performing a respective
diagonalization. In the frequency regions where just single-degenerate
bright states are present [4–5.5 eV], we can see that the first
eigenvalue of this diagonalization matches the total contribution
of the spectrum. However, in the case when almost degenerate states
are present [5.5–6 eV], we observe that although the trace
of the dynamic polarizability shows just one broad peak the first
eigenvalue splits this band, in good agreement with the LR-TDDFT results.In Table , we give
the values for the excitation energy and transition dipole moments
obtained by the Gaussian fitting procedure of the dynamical polarizability
tensor in the framework of P-TDDFT as implemented in the OCTOPUS package.[35,55] The values obtained from the solution of the Casida’s equation
as implemented in the ORCA package[57] are
shown in rows 2 and 4. We can see that both methods give the same
results even though they rely on very different approaches and implementations,
validating in this way the methodology for calculation of transition
dipole moments from P-TDDFT.Analogously, we can compare the
respective transition densities
obtained using both methods. Figure shows the isocontours for the two bright states in Table . The first transition
density (Figure a)
is obtained using the eigenvectors of Casida’s equation. The
transition densities in Figure b and c are obtained from the time-propagation of the Kohn–Sham
orbitals after applying an initial perturbation keeping the system
in the linear regime (P-TDDFT). From eq , it can be seen that we can obtain the transition
density from any propagation where the projection of the transition
dipole to the polarization direction of the electric field does not
vanish. For the first excitation of the benzaldehyde molecule, the
transition dipole moment is almost aligned along the x axis (Table and Figure a). Although, in
principle, the components of the transition dipole moment for the
other directions are not exactly zero, they take small values, and
their use for the calculations of the transition density can lead
to errors. To demonstrate this, we compared transition densities for
the propagation run with the electric field along the x axis ( = (1,0,0)) (Figure b) and the average over the
propagation runs for all three axes x, y, and z (Figure c). We can see that the propagation with the electric
field along the y axis ( = (0,1,0)) induces a lot of noise in the calculation of the transition
density due to the low excitation probability for this direction. Figure d and e show the
transition densities for the second bright state (around 4.8 eV) obtained
from LR-TDDFT and P-TDDFT, respectively. For the latter, we did a
propagation run with the electric field along the y axis, which in this case corresponds to the maximum projection of
the transition dipole moment (Table ).
Figure 4
(a–c)Transition densities (isovalue of 0.005 Å–3) for the first bright state of the isolated benzaldehyde
molecule located at 4.2 eV obtained from (a) LR-TDDFT and (b) P-TDDFT
with the electric field along the x axis, which corresponds
to the maximum component of the transition dipole moment and (c) average
over P-TDDFT runs with the electric field along x, y, and z axes. (d, e) Transition
densities (isovalue of 0.0075 Å–3) for the
second bright state located at 4.8 eV obtained from (d) LR-TDDFT and
(e) P-TDDFT with the electric field along the y axis,
which corresponds to the maximum component of the transition dipole
moment.
(a–c)Transition densities (isovalue of 0.005 Å–3) for the first bright state of the isolated benzaldehyde
molecule located at 4.2 eV obtained from (a) LR-TDDFT and (b) P-TDDFT
with the electric field along the x axis, which corresponds
to the maximum component of the transition dipole moment and (c) average
over P-TDDFT runs with the electric field along x, y, and z axes. (d, e) Transition
densities (isovalue of 0.0075 Å–3) for the
second bright state located at 4.8 eV obtained from (d) LR-TDDFT and
(e) P-TDDFT with the electric field along the y axis,
which corresponds to the maximum component of the transition dipole
moment.Again, the perfect match between
the transition densities computed
for the first two bright excitations of the isolated benzaldehyde
molecule using different methods, LR-TDDFT and P-TDDFT, validates
our new methodology.
Dimers
Now, we
can try to extract
the information on the exciton dynamics in a more complex system consisting
of two molecules applying the local density analysis procedure to get the local transition densities. Once the transition
densities for each chromophore are obtained, the exciton coupling
is computed using eq 24.Let us exemplify this method by considering
the exciton coupling for the face-to-face benzaldehyde dimer as a
function of its separation (Figure a). We place two benzalhehyde molecules at distances
along the z axis ranging from 4 to 24 Å. For
each of these dimers, we perform P-TDDFT calculations to get photoabsorption
cross sections (Figure b). The effect of the intermolecular distance is immediately observed
in the photoabsorption spectrum. We can see that as the molecules
approach each other, a small blue shift develops on the higher peak
(around 4.8 eV). There is also a transfer of the oscillator strength
at low distances for the low-lying states (around 4.2 eV), and a small
peak appears below 4 eV for the very close distance.
Figure 5
(a) Geometry of benzaldehyde
dimers. Red, yellow, and blue vectors
represent the x, y, z Cartesian axes, respectively. We call “Bnzld Left”
the benzaldehyde molecule in gold with a smaller z coordinate (left) and “Bnzld Right” the purple molecule
(right). (b) Comparison of the simulated absorption spectra for benzaldehyde
dimers for different separations of the molecules along the z axis. (c) Spectrum decomposition using the local
density analysis for the dimer with the separation along
the z axis of 4 Å. (d) Exciton coupling evaluated
for the strongest excitation around 4.8 eV for different benozaldehyde
dimers.
(a) Geometry of benzaldehyde
dimers. Red, yellow, and blue vectors
represent the x, y, z Cartesian axes, respectively. We call “Bnzld Left”
the benzaldehyde molecule in gold with a smaller z coordinate (left) and “Bnzld Right” the purple molecule
(right). (b) Comparison of the simulated absorption spectra for benzaldehyde
dimers for different separations of the molecules along the z axis. (c) Spectrum decomposition using the local
density analysis for the dimer with the separation along
the z axis of 4 Å. (d) Exciton coupling evaluated
for the strongest excitation around 4.8 eV for different benozaldehyde
dimers.The contributions of each individual
molecule to the total spectrum
can be obtained performing the local density analysis. Figure c shows
the contributions of each molecule for the dimer with the separation
along the z axis of 4 Å. Due to the small torsion
with respect to the xy plane and z axis, similar atoms of the molecules are not perfectly faced in
and have a different environment. This results in a slightly different
excitation energy for each molecule, shown in the figure by dashed
lines. After the reconstruction of the individual transition densities
with account of the effect of the other molecule, we compute the excitation
coupling in the IDA approximation (eq ) and using the TDC method (eq 24). Figure d shows the variation of the
exciton couplings obtained using different methods as functions of
the separation along the z axis. From comparison
of the couplings V(LDT) and V(TDCM), we see that for benzaldehyde
dimers, the IDA validity is limited to separations above 10 Å,
in good agreement with the results shown by Hoffman et al.[60] This demonstrates the relevance of counting
the spatial distribution of the transition density in calculations
of the exciton coupling.The deviation between the exciton couplings
computed using the
transition dipole moments of the isolated molecules (V(IM)) [ϵ
= 4.78 eV, μ⃗(3′A1) = (−0.0052 Å, −0.7293 Å, 0.0940 Å)]
and transition dipole moments computed from P-TDDFT (V(LDT)) (Table ) reveals that the
electron excitation nature is slightly modified below 8 Å; i.e.,
the direction and strength of the transition dipole moment are changed
due to the molecule–molecule interaction.
Table 2
Comparison of Excitation Energies
(ϵ, in eV), Components of the Transition Dipole Moment (μ, μ, μ, in Å), and Oscillator Strength (f) for Molecules in Benzaldehyde
Dimers with Different Separations R (in Å) along
the z Axis
R
ϵ
μx
μy
μz
fosc
4
4.85
–0.0128
–0.5974
0.0722
0.1537
4.82
–0.0102
–0.5994
0.0963
0.1556
6
4.81
0.0088
0.6651
–0.0897
0.1896
4.81
0.0071
0.6678
–0.0902
0.1911
8
4.80
–0.0063
–0.6930
0.0924
0.2053
4.80
–0.0059
–0.6934
0.0919
0.2055
10
4.79
0.0051
0.7048
–0.0928
0.2118
4.79
–0.0052
–0.7050
0.0924
0.2119
12
4.79
–0.0049
–0.7105
0.0929
0.2152
4.79
–0.0049
–0.7103
0.0927
0.2151
16
4.79
–0.0047
–0.7153
0.0930
0.2181
4.79
–0.0047
–0.7152
0.0929
0.2180
20
4.79
–0.0047
–0.7276
0.0944
0.2256
4.79
–0.0047
–0.7277
0.0943
0.2256
24
4.78
–0.0048
–0.7284
0.0943
0.2256
4.78
–0.0048
–0.7286
0.0944
0.2257
Table shows the
values of the computed exciton coupling for the different methods.
Columns 6 and 5 show the contributions of the Coulomb and exchange-correlation
(XC) terms, respectively, to the coupling V(TDCM) (eq 24). We see
that the Förster mechanism coming from the Coulomb interaction
governs at the considered distances, and it is not until very close
distances (below 6 Å) that the Dexter mechanism related to the
exchange-correlation effects becomes non-negligible. This fact is
also attributed to the use of the semilocal GGA exchange-correlation
functional such as PBE.[61,62] We expect that the
use of long-range XC functionals[63−66] modifies this trend, and the
XC term should become more significant also at larger distances.
Table 3
Exciton Couplings V(IM), V(LDT), V(TDCM)
(in cm–1) and Contributions of Coulomb (Vh) and Exchange-Correlation (VXC) Terms to V(TDCM) for Dimers of Benzaldehyde with Different
Separations R (in Å) along the z Axis
R
V(IM)
V(LDT)
V(TDCM)
Vh
VXC
4.0
933.313
618.470
329.559
328.114
1.445
6.0
276.537
231.079
168.345
168.3662
0.0210
8.0
116.664
105.256
87.874
87.874
0.000
10.0
59.732
55.733
49.392
–49.392
0.000
12.0
34.567
32.746
30.170
30.170
0.000
16.0
14.583
14.034
13.353
13.353
0.000
20.0
7.467
7.420
7.640
7.640
0.000
24.0
4.321
4.2745
4.470
4.470
0.000
Complex Multichromophore System
Let
us now consider a complex system with more than two photoactive molecules.
We have created a cluster consisting of 14 randomly oriented benzaldehyde
molecules. To ensure a plausible disposition, during the cluster generation,
we avoid interatomic distances between atoms of different molecules
smaller than the sum of the covalent radii plus 30% of the corresponding
radii. Figure a shows
the spacial distribution of the 14 molecules in the cluster with the
distances between centers-of-mass of the molecules ranging between
5.17 and 19.86 Å.
Figure 6
(a) Geometrical distribution of 14 benzaldehyde molecules
in the
cluster. (b) Spectrum decomposition for the 14 benzaldehyde cluster.
(a) Geometrical distribution of 14 benzaldehyde molecules
in the
cluster. (b) Spectrum decomposition for the 14 benzaldehyde cluster.After the calculation of the ground
state for the full system,
the local density analysis is carried out in order
to determine the charge density belonging to each molecule. The appropriateness
of each local density domain is validated by its total charge. It
is checked that the valence charge corresponds to 40 electrons for
each molecule, with the maximum deviation found of 0.003 electron
charge (which corresponds to the error of 0.00075%). Then, we perform
three P-TDDFT calculations with the electric field perturbation applied
along each of the Cartesian axes. We propagate the system for the
total propagation time of 40 fs. For each local domain, the dynamic
polarizability is calculated from the local induced dipole moment,
and therefore, the local contribution of each molecule to the global
absorption spectrum is obtained (Figure b). Also, as described above, the transition
dipole moments for a each peak are obtained by fitting the diagonalized
dynamic polarizability tensor (Table S3). Finally, we compute the transition density for a given excitation
for each molecule of the cluster defined for the corresponding charge
density domain using eq . The computed transition densities at the most intense peak below
5 eV are influenced by the presence of the embedding environment (Figure S2). The effects due to spurious contamination
of near located bright states can be evaluated by comparing the transition
dipole moments obtained by the Gaussian fit and by applying the dipole
operator over the transition density, analogously to eq . Tables S2–S4 show this comparison, which corresponds to a mean deviation of 0.02
Å in the transition dipole moments and a mean angle twist less
than 6°.We compute now the exciton coupling for the entire
system using
the different approaches described above. A comparison of the values
obtained for all pairs of exciton coupling are specified in Tables S5 and S6. Figure shows the differences in the exciton couplings
computed using TDCM (eq 24) and LDT (eq ), i.e., the transition densities from eq and the transition dipole
moments from the fit and diagonalization of the dynamic polarizability
tensor (eq ). The difference
between both methods is not homogeneous and strongly depends on the
specific pair of molecules.
Figure 7
(a) Correlation between the values computed
using the transition
density cube method (V(TDCM)) versus the values computed from the
ideal dipole approximation using the transition dipole moments found
for local domains from the fit of the diagonalized dynamic polarizability
tensor (V(LDT)). (b) Difference between V(LDT) and V(TDCM) as a function
of the center-of-mass distance.
(a) Correlation between the values computed
using the transition
density cube method (V(TDCM)) versus the values computed from the
ideal dipole approximation using the transition dipole moments found
for local domains from the fit of the diagonalized dynamic polarizability
tensor (V(LDT)). (b) Difference between V(LDT) and V(TDCM) as a function
of the center-of-mass distance.We can see from Figure b that the ideal dipole approximation is valid for
the intermolecular
distances (distances between the centers of mass) larger than 12 Å.
Hence, the excitation energy transfer between those molecules can
be explained by the Förster resonant mechanism. However, at
lower distances, this approximation fails as the V(TDCM) and V(LDT)
values largely differ. This fact demonstrates the need for the method
that enables accurate calculations of transition densities for individual
subunits by treating all the system at the same level of theory.
Conclusions
In this work, we demonstrate
that treating all the complex photoactive
systems at the ab initio level of theory allows for
accurate calculations of the exciton dynamic properties. Although
our approach suffers from intrinsic limitations of some exchange-correlation
functionals in the TDDFT method such as the proper description of
charge-transfer states, it can provide a more accurate alternative
to other approaches for weakly interacting large systems by including
explicitly the quantum mechanical environment effects.In this
paper, we derived an analytic method to obtain transition
dipole moments and transition densities from time-propagation TDDFT
calculation in the linear-response regime (P-TDDFT). We validated
that the transition dipole moment can be obtained by Gaussian fitting
of the absorption spectra, and its direction is recovered from the
eigenvectors of the dynamic polarizability diagonalization. We proved
that the transition density for a given excitation can be accurately
recovered from the Fourier transform of the time-dependent response
density using the previous knowledge of the corresponding transition
moment.More interesting, we introduced the local density
analysis to determine the transition properties for multichromophore
systems.
This procedure allows us to accurately extract transition dipole moments
and transition densities for individual molecules taking into account
all effects due to their environment since the entire system is modeled
at the same level of theory. The calculation of these properties enables
studies of exciton coupling in complex systems, a key parameter to
understand the energy transfer processes taking place, for example,
in photosynthetic light-harvesting complexes or the light-emitting
layer of OLED devices.This method also makes possible for disentangling
the mechanisms
of exciton transfer. The contribution of different interactions can
easily be evaluated. In this work, we included the Coulomb and exchange-correlation
effect (for density-dependent XC functionals), but other mechanisms
such as explicit terms due to the polarizable environment[48,67] can be considered as well.It is important to mention that
this method is implemented into
the open-source OCTOPUS package, which provides a platform for performing
P-TDDFT in the real-space basis. It is highly parallelized and is
therefore suitable for efficient calculations of exciton couplings
in large and complex systems.