Literature DB >> 31076735

A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing.

Nathalie Gonzalez1,2,3, Marieke Dubois1,2, Dirk Inzé4,5, Ting Li1,2, Annelore Natran1,2, Yanjun Chen6, Jasmien Vercruysse1,2, Kun Wang6.   

Abstract

Post-transcriptional gene silencing (PTGS) is a major mechanism regulating gene expression in higher eukaryotes. To identify novel players in PTGS, a forward genetics screen was performed on an Arabidopsis thaliana line overexpressing a strong growth-repressive gene, ETHYLENE RESPONSE FACTOR6 (ERF6). We identified six independent ethyl-methanesulfonate mutants rescuing the dwarfism of ERF6-overexpressing plants as a result of transgene silencing. Among the causative genes, ETHYLENE-INSENSITIVE5, SUPERKILLER2 and HASTY1 have previously been reported to inhibit PTGS. Notably, the three other causative genes have not, to date, been related to PTGS: UTP:RNA-URIDYLYLTRANSFERASE1 (URT1), C-TERMINAL DOMAIN PHOSPHATASE-LIKE3 (CPL3) and RESURRECTION1 (RST1). We show that these genes may participate in protecting the 3' end of transgene transcripts. We present a model in which URT1, CPL3 and RST1 are classified as PTGS suppressors, as compromisation of these genes provokes the accumulation of aberrant transcripts which, in turn, trigger the production of small interfering RNAs, initiating RNA silencing.

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Year:  2019        PMID: 31076735     DOI: 10.1038/s41477-019-0419-7

Source DB:  PubMed          Journal:  Nat Plants        ISSN: 2055-0278            Impact factor:   15.793


  3 in total

1.  Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: five novel mutant loci integrated into a stress response pathway.

Authors:  G Roman; B Lubarsky; J J Kieber; M Rothenberg; J R Ecker
Journal:  Genetics       Date:  1995-03       Impact factor: 4.562

2.  [Tuberculosis in the Ural and Volgo-Vyatka regions and means for optimizing antituberculosis activity].

Authors:  V A Arenskiĭ; V A Vatolina
Journal:  Probl Tuberk       Date:  1992

3.  HASTY: a gene that regulates the timing of shoot maturation in Arabidopsis thaliana.

Authors:  A Telfer; R S Poethig
Journal:  Development       Date:  1998-05       Impact factor: 6.868

  3 in total
  13 in total

1.  RST1 Is a FREE1 Suppressor That Negatively Regulates Vacuolar Trafficking in Arabidopsis.

Authors:  Qiong Zhao; Jinbo Shen; Caiji Gao; Yong Cui; Yongyi Wang; Jie Cui; Lixin Cheng; Wenhan Cao; Ying Zhu; Shuxian Huang; Qianzi Zhou; Cheuk Ka Leong; King Pong Leung; Xuemei Chen; Liwen Jiang
Journal:  Plant Cell       Date:  2019-06-20       Impact factor: 11.277

2.  A Molecular switch for FLOWERING LOCUS C activation determines flowering time in Arabidopsis.

Authors:  Lisha Shen; Yu Zhang; Nunchanoke Sawettalake
Journal:  Plant Cell       Date:  2022-02-03       Impact factor: 11.277

3.  Molecular mechanism underlying the di-uridylation activity of Arabidopsis TUTase URT1.

Authors:  Qian Hu; Huiru Yang; Mingwei Li; Lingru Zhu; Mengqi Lv; Fudong Li; Zhiyong Zhang; Guodong Ren; Qingguo Gong
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

4.  Uridylation and the SKI complex orchestrate the Calvin cycle of photosynthesis through RNA surveillance of TKL1 in Arabidopsis.

Authors:  Xiaoyan Wang; Wenwen Kong; Yuan Wang; Jinhui Wang; Luyao Zhong; Kangwen Lao; Xianxin Dong; Dingyu Zhang; He Huang; Beixin Mo; Yu Yu; Guodong Ren
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-12       Impact factor: 12.779

5.  The role of RST1 and RIPR proteins in plant RNA quality control systems.

Authors:  Mariann Auth; Tünde Nyikó; Andor Auber; Dániel Silhavy
Journal:  Plant Mol Biol       Date:  2021-04-17       Impact factor: 4.076

6.  RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis.

Authors:  Heike Lange; Simon Y A Ndecky; Carlos Gomez-Diaz; David Pflieger; Nicolas Butel; Julie Zumsteg; Lauriane Kuhn; Christina Piermaria; Johana Chicher; Michael Christie; Ezgi S Karaaslan; Patricia L M Lang; Detlef Weigel; Hervé Vaucheret; Philippe Hammann; Dominique Gagliardi
Journal:  Nat Commun       Date:  2019-08-27       Impact factor: 14.919

7.  The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis.

Authors:  Hélène Scheer; Caroline de Almeida; Emilie Ferrier; Quentin Simonnot; Laure Poirier; David Pflieger; François M Sement; Sandrine Koechler; Christina Piermaria; Paweł Krawczyk; Seweryn Mroczek; Johana Chicher; Lauriane Kuhn; Andrzej Dziembowski; Philippe Hammann; Hélène Zuber; Dominique Gagliardi
Journal:  Nat Commun       Date:  2021-02-26       Impact factor: 14.919

8.  mRNA surveillance complex PELOTA-HBS1 regulates phosphoinositide-dependent protein kinase1 and plant growth.

Authors:  Wei Kong; Shutang Tan; Qing Zhao; De-Li Lin; Zhi-Hong Xu; Jiří Friml; Hong-Wei Xue
Journal:  Plant Physiol       Date:  2021-08-03       Impact factor: 8.005

9.  Analysis of mRNA-derived siRNAs in mutants of mRNA maturation and surveillance pathways in Arabidopsis thaliana.

Authors:  Michal Krzyszton; Joanna Kufel
Journal:  Sci Rep       Date:  2022-01-27       Impact factor: 4.996

Review 10.  Cyclin-Dependent Kinases and CTD Phosphatases in Cell Cycle Transcriptional Control: Conservation across Eukaryotic Kingdoms and Uniqueness to Plants.

Authors:  Zhi-Liang Zheng
Journal:  Cells       Date:  2022-01-14       Impact factor: 6.600

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