Literature DB >> 31053593

Filamentation Regulatory Pathways Control Adhesion-Dependent Surface Responses in Yeast.

Jacky Chow1, Izzy Starr1, Sheida Jamalzadeh2, Omar Muniz1, Anuj Kumar3, Omer Gokcumen1, Denise M Ferkey1, Paul J Cullen4.   

Abstract

Signaling pathways can regulate biological responses by the transcriptional regulation of target genes. In yeast, multiple signaling pathways control filamentous growth, a morphogenetic response that occurs in many species including fungal pathogens. Here, we examine the role of signaling pathways that control filamentous growth in regulating adhesion-dependent surface responses, including mat formation and colony patterning. Expression profiling and mutant phenotype analysis showed that the major pathways that regulate filamentous growth [filamentous growth MAPK (fMAPK), RAS, retrograde (RTG), RIM101, RPD3, ELP, SNF1, and PHO85] also regulated mat formation and colony patterning. The chromatin remodeling complex, SAGA, also regulated these responses. We also show that the RAS and RTG pathways coregulated a common set of target genes, and that SAGA regulated target genes known to be controlled by the fMAPK, RAS, and RTG pathways. Analysis of surface growth-specific targets identified genes that respond to low oxygen, high temperature, and desiccation stresses. We also explore the question of why cells make adhesive contacts in colonies. Cell adhesion contacts mediated by the coregulated target and adhesion molecule, Flo11p, deterred entry into colonies by macroscopic predators and impacted colony temperature regulation. The identification of new regulators (e.g., SAGA), and targets of surface growth in yeast may provide insights into fungal pathogenesis in settings where surface growth and adhesion contributes to virulence.
Copyright © 2019 by the Genetics Society of America.

Entities:  

Keywords:  MAPK pathways; biofilm; complex colony; expression profiling; fungal pathogenesis; invasive growth; mat; microbial predator–prey relationships; pseudohyphal growth; signaling networks; temperature control

Mesh:

Substances:

Year:  2019        PMID: 31053593      PMCID: PMC6614897          DOI: 10.1534/genetics.119.302004

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  171 in total

1.  A genomic locus in Saccharomyces cerevisiae with four genes up-regulated by osmotic stress.

Authors:  V J Miralles; R Serrano
Journal:  Mol Microbiol       Date:  1995-08       Impact factor: 3.501

Review 2.  Mitochondrial retrograde signaling.

Authors:  Zhengchang Liu; Ronald A Butow
Journal:  Annu Rev Genet       Date:  2006       Impact factor: 16.830

Review 3.  Functions of SAGA in development and disease.

Authors:  Li Wang; Sharon Y R Dent
Journal:  Epigenomics       Date:  2014-06       Impact factor: 4.778

4.  High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method.

Authors:  R Daniel Gietz; Robert H Schiestl
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 5.  Saccharomyces cerevisiae--a model to uncover molecular mechanisms for yeast biofilm biology.

Authors:  Rasmus K Bojsen; Kaj Scherz Andersen; Birgitte Regenberg
Journal:  FEMS Immunol Med Microbiol       Date:  2012-03-08

6.  The cell surface flocculin Flo11 is required for pseudohyphae formation and invasion by Saccharomyces cerevisiae.

Authors:  W S Lo; A M Dranginis
Journal:  Mol Biol Cell       Date:  1998-01       Impact factor: 4.138

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Journal:  Mol Biol Cell       Date:  2004-09-29       Impact factor: 4.138

8.  HTSeq--a Python framework to work with high-throughput sequencing data.

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Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

9.  Environmental and genetic determinants of colony morphology in yeast.

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Authors:  Anasua B Kusari; Douglas M Molina; Walid Sabbagh; Chang S Lau; Lee Bardwell
Journal:  J Cell Biol       Date:  2004-01-19       Impact factor: 10.539

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  4 in total

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