Literature DB >> 31051174

Teaching an Old Virus New Tricks: A Review on New Approaches to Study Age-Old Questions in Influenza Biology.

Seema S Lakdawala1, Nara Lee2, Christopher B Brooke3.   

Abstract

Influenza viruses have been studied for over 80 years, yet much about the basic viral lifecycle remain unknown. However, new imaging, biochemical, and sequencing techniques have revealed significant insight into many age-old questions of influenza virus biology. In this review, we will cover the role of imaging techniques to describe unique aspects of influenza virus assembly, biochemical techniques to study viral genomic organization, and next-generation sequencing to explore influenza genomic evolution. Our goal is to provide a brief overview of how emerging techniques are being used to answer basic questions about influenza viruses. This is not a comprehensive list of emerging techniques, rather ones that we feel will continue to make significant contributions to field of influenza biology.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA–RNA interactions; RNA–protein interactions; influenza virus; microscopy; next-generation sequencing

Mesh:

Substances:

Year:  2019        PMID: 31051174      PMCID: PMC6821588          DOI: 10.1016/j.jmb.2019.04.038

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  97 in total

1.  Single molecule imaging of RNA in situ.

Authors:  Mona Batish; Arjun Raj; Sanjay Tyagi
Journal:  Methods Mol Biol       Date:  2011

Review 2.  A guide to light-sheet fluorescence microscopy for multiscale imaging.

Authors:  Rory M Power; Jan Huisken
Journal:  Nat Methods       Date:  2017-03-31       Impact factor: 28.547

3.  Identification of host RNAs that interact with EBV noncoding RNA EBER2.

Authors:  Adalena V Nanni; Nara Lee
Journal:  RNA Biol       Date:  2018-09-18       Impact factor: 4.652

Review 4.  Pandemic influenza: certain uncertainties.

Authors:  David M Morens; Jeffery K Taubenberger
Journal:  Rev Med Virol       Date:  2011-06-27       Impact factor: 6.989

5.  Structure of the ribonucleoprotein of influenza virus.

Authors:  R W Compans; J Content; P H Duesberg
Journal:  J Virol       Date:  1972-10       Impact factor: 5.103

6.  Influenza A virus transmission bottlenecks are defined by infection route and recipient host.

Authors:  Andrew Varble; Randy A Albrecht; Simone Backes; Marshall Crumiller; Nicole M Bouvier; David Sachs; Adolfo García-Sastre; Benjamin R tenOever
Journal:  Cell Host Microbe       Date:  2014-10-23       Impact factor: 21.023

7.  Functional Constraint Profiling of a Viral Protein Reveals Discordance of Evolutionary Conservation and Functionality.

Authors:  Nicholas C Wu; C Anders Olson; Yushen Du; Shuai Le; Kevin Tran; Roland Remenyi; Danyang Gong; Laith Q Al-Mawsawi; Hangfei Qi; Ting-Ting Wu; Ren Sun
Journal:  PLoS Genet       Date:  2015-07-01       Impact factor: 5.917

8.  The effective rate of influenza reassortment is limited during human infection.

Authors:  Ashley Sobel Leonard; Micah T McClain; Gavin J D Smith; David E Wentworth; Rebecca A Halpin; Xudong Lin; Amy Ransier; Timothy B Stockwell; Suman R Das; Anthony S Gilbert; Rob Lambkin-Williams; Geoffrey S Ginsburg; Christopher W Woods; Katia Koelle; Christopher J R Illingworth
Journal:  PLoS Pathog       Date:  2017-02-07       Impact factor: 6.823

9.  Single-Cell Virus Sequencing of Influenza Infections That Trigger Innate Immunity.

Authors:  Alistair B Russell; Elizaveta Elshina; Jacob R Kowalsky; Aartjan J W Te Velthuis; Jesse D Bloom
Journal:  J Virol       Date:  2019-06-28       Impact factor: 5.103

10.  Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization.

Authors:  Timothy D Majarian; Robert F Murphy; Seema S Lakdawala
Journal:  PLoS Comput Biol       Date:  2019-01-28       Impact factor: 4.475

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  2 in total

Review 1.  The Development and Use of Reporter Influenza B Viruses.

Authors:  Rebekah E Dumm; Nicholas S Heaton
Journal:  Viruses       Date:  2019-08-09       Impact factor: 5.048

Review 2.  RNA Secondary Structure as a First Step for Rational Design of the Oligonucleotides towards Inhibition of Influenza A Virus Replication.

Authors:  Marta Szabat; Dagny Lorent; Tomasz Czapik; Maria Tomaszewska; Elzbieta Kierzek; Ryszard Kierzek
Journal:  Pathogens       Date:  2020-11-07
  2 in total

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