| Literature DB >> 31050904 |
Louis Lagardère1,2, Félix Aviat2,3, Jean-Philip Piquemal3,4,5.
Abstract
We propose an incremental construction of multi-time-step integrators to accelerate polarizable point dipole molecular dynamics while preserving sampling efficiency. We start by building integrators using frequency-driven splittings of energy terms and a Velocity-Verlet evaluation of the most rapidly varying forces and compare a standard bonded/nonbonded split to a three-group split dividing nonbonded forces (including polarization) into short- and long-range contributions. We then introduce new approaches by coupling these splittings to Langevin dynamics and to Leimkuhler's BAOAB integrator in order to reach larger time steps (6 fs) for long-range forces. We further increase sampling efficiency by (i) accelerating the polarization evaluation using a fast/noniterative truncated conjugate gradient (TCG-1) as a short-range solver and (ii) pushing the outer time step to 10 fs using hydrogen mass repartitioning. The new BAOAB-RESPA1 integrators demonstrate up to a 7-fold acceleration over standard 1 fs (Tinker-HP) integration and reduce the performance gap between polarizable and classical force fields while preserving static and dynamical properties.Entities:
Year: 2019 PMID: 31050904 DOI: 10.1021/acs.jpclett.9b00901
Source DB: PubMed Journal: J Phys Chem Lett ISSN: 1948-7185 Impact factor: 6.475