Literature DB >> 3104618

Evolutionary aspects of trypanosomes: analysis of genes.

P A Michels.   

Abstract

The genes for four glycolytic enzymes of Trypanosoma brucei have been analyzed. The proteins encoded by these genes show 38-57% identity with their counterparts in other organisms, whether pro- or eukaryotic. These data are consistent with a phylogenetic tree in which trypanosomes diverged very early from the main branch of the eukaryotic lineage. No definite conclusion can be drawn yet about the evolutionary origin of glycosomes, the microbodies of trypanosomes which contain most enzymes of the glycolytic pathway. A bias could be observed in the codon usage of the glycolytic genes and genes for other housekeeping proteins, indicating that trypanosomes may have selected a nucleotide sequence that enables efficient translation. However, the genes for variant surface glycoproteins (VSGs) do not show such a bias. This lack of preference for special codons is explained by the high evolutionary rate that could be observed for VSG genes.

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Year:  1986        PMID: 3104618     DOI: 10.1007/bf02099950

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  42 in total

1.  The amino acid sequence of a cytochrome c from a protozoan Crithidia oncopelti.

Authors:  G W. Pettigrew
Journal:  FEBS Lett       Date:  1972-04-15       Impact factor: 4.124

2.  Nucleotide sequence of a macronuclear DNA molecule coding for alpha-tubulin from the ciliate Stylonychia lemnae. Special codon usage: TAA is not a translation termination codon.

Authors:  E Helftenbein
Journal:  Nucleic Acids Res       Date:  1985-01-25       Impact factor: 16.971

3.  Distinction of African trypanosome species using nucleic acid hybridization.

Authors:  N N Massamba; R O Williams
Journal:  Parasitology       Date:  1984-02       Impact factor: 3.234

4.  Two modes of activation of a single surface antigen gene of Trypanosoma brucei.

Authors:  A Bernards; T De Lange; P A Michels; A Y Liu; M J Huisman; P Borst
Journal:  Cell       Date:  1984-01       Impact factor: 41.582

5.  Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs.

Authors:  T Ikemura
Journal:  J Mol Biol       Date:  1982-07-15       Impact factor: 5.469

6.  Tubulin genes of the African trypanosome Trypanosoma brucei rhodesiense:nucleotide sequence of a 3.7-kb fragment containing genes for alpha and beta tubulins.

Authors:  B E Kimmel; S Samson; J Wu; R Hirschberg; L R Yarbrough
Journal:  Gene       Date:  1985       Impact factor: 3.688

7.  Nucleotide sequence of the Escherichia coli gap gene. Different evolutionary behavior of the NAD+-binding domain and of the catalytic domain of D-glyceraldehyde-3-phosphate dehydrogenase.

Authors:  G Branlant; C Branlant
Journal:  Eur J Biochem       Date:  1985-07-01

Review 8.  Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes.

Authors:  H Grosjean; W Fiers
Journal:  Gene       Date:  1982-06       Impact factor: 3.688

9.  Gene activation and re-expression of a Trypanosoma brucei variant surface glycoprotein.

Authors:  F Michiels; G Matthyssens; P Kronenberger; E Pays; B Dero; S Van Assel; M Darville; A Carvador; M Steinert; R Hamers
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

10.  Purification, morphometric analysis, and characterization of the glycosomes (microbodies) of the protozoan hemoflagellate Trypanosoma brucei.

Authors:  F R Opperdoes; P Baudhuin; I Coppens; C De Roe; S W Edwards; P J Weijers; O Misset
Journal:  J Cell Biol       Date:  1984-04       Impact factor: 10.539

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  5 in total

1.  Characterisation of the gene encoding type II DNA topoisomerase from Leishmania donovani: a key molecular target in antileishmanial therapy.

Authors:  A Das; A Dasgupta; S Sharma; M Ghosh; T Sengupta; S Bandopadhyay; H K Majumder
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

Review 2.  Triosephosphate isomerase: a highly evolved biocatalyst.

Authors:  R K Wierenga; E G Kapetaniou; R Venkatesan
Journal:  Cell Mol Life Sci       Date:  2010-08-07       Impact factor: 9.261

3.  Trypanosoma cruzi glycosomal glyceraldehyde-3-phosphate dehydrogenase does not conform to the 'hotspot' topogenic signal model.

Authors:  G Kendall; A F Wilderspin; F Ashall; M A Miles; J M Kelly
Journal:  EMBO J       Date:  1990-09       Impact factor: 11.598

4.  Codon usage suggests that translational selection has a major impact on protein expression in trypanosomatids.

Authors:  David Horn
Journal:  BMC Genomics       Date:  2008-01-03       Impact factor: 3.969

5.  Transcriptome analysis of the bloodstream stage from the parasite Trypanosoma vivax.

Authors:  Gonzalo Greif; Miguel Ponce de Leon; Guillermo Lamolle; Matías Rodriguez; Dolores Piñeyro; Lucinda M Tavares-Marques; Armando Reyna-Bello; Carlos Robello; Fernando Alvarez-Valin
Journal:  BMC Genomics       Date:  2013-03-05       Impact factor: 3.969

  5 in total

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