Literature DB >> 31046051

Extracting value: mechanistic insights into the formation of natural product artifacts - case studies in marine natural products.

Robert J Capon1.   

Abstract

Covering: up to the end of 2018Natural selection relentlessly drives the evolution of natural products, favoring those that enhance the survival of species. During this evolutionary journey, some natural products acquire heightened chemical reactivity towards environmental stimuli, most likely benefiting host species through more agile ecological responses, leading to superior survival outcomes (i.e., more potent and faster acting toxins and chemical defences, infection control, and intra/inter species chemical communication). Although knowledge of natural products informs our understanding of the living world, inspiring new medicines, agrochemicals and scientific tools, the study of chemically reactive natural products can be particularly informative, albeit quite challenging. For example, such natural products are often prone to facile transformations during handling, yielding new "un-natural" products commonly referred to as artifacts. These transformations can be induced by many stimuli, including modest changes in pH or temperature, or exposure to light or air (i.e., oxygen), or even common organic solvents or chromatography media. Sadly, in the race to explore and report on new natural products, knowledge of the relationship between chemically reactive natural products and their artifacts is not always recognised, documented or valued. This review seeks to recalibrate and encourage a greater awareness of the relationship between natural products and artifacts, by examining case studies in the field of marine natural products chemistry (i.e., natural products and associated artifacts from marine invertebrates and algae, and marine-derived microbes). While every effort has been made to provide a comprehensive coverage up to early 2019, any omissions are inadvertent not deliberate. Structured around the types of chemical transformations that can deliver artifacts, and the functional groups involved, the review concludes with observations on how to regulate, detect, rationalise and even exploit artifacts, going forward.

Entities:  

Year:  2019        PMID: 31046051     DOI: 10.1039/c9np00013e

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  22 in total

Review 1.  Droplet probe: coupling chromatography to the in situ evaluation of the chemistry of nature.

Authors:  Nicholas H Oberlies; Sonja L Knowles; Chiraz Soumia M Amrine; Diana Kao; Vilmos Kertesz; Huzefa A Raja
Journal:  Nat Prod Rep       Date:  2019-05-21       Impact factor: 13.423

2.  Reactivity, fate and functional roles of dissolved organic matter in anoxic inland waters.

Authors:  Maximilian P Lau; Paul Del Giorgio
Journal:  Biol Lett       Date:  2020-02-26       Impact factor: 3.703

3.  The Role of Total Synthesis in Structure Revision and Elucidation of Decanolides (Nonanolides).

Authors:  Bernd Schmidt
Journal:  Prog Chem Org Nat Prod       Date:  2021

Review 4.  Natural Enantiomers: Occurrence, Biogenesis and Biological Properties.

Authors:  Jin-Hai Yu; Zhi-Pu Yu; Robert J Capon; Hua Zhang
Journal:  Molecules       Date:  2022-02-14       Impact factor: 4.411

Review 5.  Nuisance compounds in cellular assays.

Authors:  Jayme L Dahlin; Douglas S Auld; Ina Rothenaigner; Steve Haney; Jonathan Z Sexton; J Willem M Nissink; Jarrod Walsh; Jonathan A Lee; John M Strelow; Francis S Willard; Lori Ferrins; Jonathan B Baell; Michael A Walters; Bruce K Hua; Kamyar Hadian; Bridget K Wagner
Journal:  Cell Chem Biol       Date:  2021-02-15       Impact factor: 8.116

6.  Silica Gel-mediated Oxidation of Prenyl Motifs Generates Natural Product-Like Artifacts.

Authors:  Yu Tang; J Brent Friesen; Dejan S Nikolić; David C Lankin; James B McAlpine; Shao-Nong Chen; Guido F Pauli
Journal:  Planta Med       Date:  2021-05-11       Impact factor: 3.007

7.  Fungal Epithiodiketopiperazines Carrying α,β-Polysulfide Bridges from Penicillium steckii YE, and Their Chemical Interconversion.

Authors:  Guangde Jiang; Peilan Zhang; Ranjala Ratnayake; Guang Yang; Yi Zhang; Ran Zuo; Magan Powell; José C Huguet-Tapia; Khalil A Abboud; Long H Dang; Max Teplitski; Valerie Paul; Rui Xiao; K H Ahammad; Uz Zaman; Zhenquan Hu; Shugeng Cao; Hendrik Luesch; Yousong Ding
Journal:  Chembiochem       Date:  2020-09-30       Impact factor: 3.164

8.  Cytotoxic Naphthoquinone Analogues, Including Heterodimers, and Their Structure Elucidation Using LR-HSQMBC NMR Experiments.

Authors:  Laura Flores-Bocanegra; Huzefa A Raja; Jeffrey W Bacon; Amanda C Maldonado; Joanna E Burdette; Cedric J Pearce; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2020-10-02       Impact factor: 4.050

9.  Three diketomorpholines from a Penicillium sp. (strain G1071).

Authors:  Zeinab Y Al Subeh; Huzefa A Raja; Joanna E Burdette; Joseph O Falkinham; Scott E Hemby; Nicholas H Oberlies
Journal:  Phytochemistry       Date:  2021-06-20       Impact factor: 4.004

10.  Identification of a Pyrrole Intermediate Which Undergoes C-Glycosidation and Autoxidation to Yield the Final Product in Showdomycin Biosynthesis.

Authors:  Daan Ren; Minje Kim; Shao-An Wang; Hung-Wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2021-06-24       Impact factor: 16.823

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