Literature DB >> 31041503

Retrieving forensic information about the donor through bacterial profiling.

Katherine Phan1, Mark Barash2, Xanthe Spindler1, Peter Gunn1, Claude Roux1.   

Abstract

When fingermarks are left on a surface, bacteria originating from the donor's skin are also deposited. The skin microbiome is believed to be extremely diverse between individuals, allowing for potential matching between the bacterial communities and touched objects, known as "bacterial profiling". This study stepped further and investigated how the bacterial profile could be used as an indicator of donor characteristics of potential forensic intelligence interest. Forty-five participants were asked to touch DNA-free playing cards with their dominant and non-dominant hands. Cards were swabbed and bacterial communities determined through 16S rRNA sequencing. Diversity and abundance of bacteria were compared to donor characteristics of gender, age, ethnicity, handedness, home location, sample location, occupation, diet type, use of moisturisers, use of hand sanitisers and use of public transport. Correlations between the bacterial profile with gender, ethnicity, diet type and hand sanitiser use were found. Specifically, the absence of Lactococcus indicated a primarily Chinese diet, while the absence of Alloiococcus indicated female gender, Asian ethnicity and hand sanitiser use. Testing of the prediction models demonstrated highest accuracy for gender estimation, while the prediction of other characteristics showed lower success. This study showed a correlation between the presence of certain bacterial species on donor's hands and personal characteristics of potential forensic relevance, thus demonstrating a novel application of microbiome genotyping in forensic science.

Entities:  

Keywords:  Bacterial profiling; Forensic microbiology; Investigative microbiology; Massively parallel sequencing

Mesh:

Substances:

Year:  2019        PMID: 31041503     DOI: 10.1007/s00414-019-02069-2

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  29 in total

1.  Forensic identification using skin bacterial communities.

Authors:  Noah Fierer; Christian L Lauber; Nick Zhou; Daniel McDonald; Elizabeth K Costello; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

2.  Molecular analysis of human forearm superficial skin bacterial biota.

Authors:  Zhan Gao; Chi-hong Tseng; Zhiheng Pei; Martin J Blaser
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-09       Impact factor: 11.205

3.  A diversity profile of the human skin microbiota.

Authors:  Elizabeth A Grice; Heidi H Kong; Gabriel Renaud; Alice C Young; Gerard G Bouffard; Robert W Blakesley; Tyra G Wolfsberg; Maria L Turner; Julia A Segre
Journal:  Genome Res       Date:  2008-05-23       Impact factor: 9.043

4.  A SNP in the ABCC11 gene is the determinant of human earwax type.

Authors:  Koh-ichiro Yoshiura; Akira Kinoshita; Takafumi Ishida; Aya Ninokata; Toshihisa Ishikawa; Tadashi Kaname; Makoto Bannai; Katsushi Tokunaga; Shunro Sonoda; Ryoichi Komaki; Makoto Ihara; Vladimir A Saenko; Gabit K Alipov; Ichiro Sekine; Kazuki Komatsu; Haruo Takahashi; Mitsuko Nakashima; Nadiya Sosonkina; Christophe K Mapendano; Mohsen Ghadami; Masayo Nomura; De-Sheng Liang; Nobutomo Miwa; Dae-Kwang Kim; Ariuntuul Garidkhuu; Nagato Natsume; Tohru Ohta; Hiroaki Tomita; Akira Kaneko; Mihoko Kikuchi; Graciela Russomando; Kenji Hirayama; Minaka Ishibashi; Aya Takahashi; Naruya Saitou; Jeffery C Murray; Susumu Saito; Yusuke Nakamura; Norio Niikawa
Journal:  Nat Genet       Date:  2006-01-29       Impact factor: 38.330

Review 5.  Techniques that acquire donor profiling information from fingermarks - A review.

Authors:  Annemieke van Dam; Fleur T van Beek; Maurice C G Aalders; Ton G van Leeuwen; Saskia A G Lambrechts
Journal:  Sci Justice       Date:  2016-01-05       Impact factor: 2.124

6.  Bacterial community variation in human body habitats across space and time.

Authors:  Elizabeth K Costello; Christian L Lauber; Micah Hamady; Noah Fierer; Jeffrey I Gordon; Rob Knight
Journal:  Science       Date:  2009-11-05       Impact factor: 47.728

7.  Alloiococcus otitidis--otitis media pathogen or normal bacterial flora?

Authors:  Krister Tano; Robert von Essen; P O Eriksson; Anders Sjöstedt
Journal:  APMIS       Date:  2008-09       Impact factor: 3.205

8.  Structure, function and diversity of the healthy human microbiome.

Authors: 
Journal:  Nature       Date:  2012-06-13       Impact factor: 49.962

Review 9.  Microbial forensics: the next forensic challenge.

Authors:  Bruce Budowle; Randall Murch; Ranajit Chakraborty
Journal:  Int J Legal Med       Date:  2005-04-09       Impact factor: 2.791

10.  Is human DNA enough?-potential for bacterial DNA.

Authors:  Sarah L Leake
Journal:  Front Genet       Date:  2013-12-13       Impact factor: 4.599

View more
  6 in total

1.  Impact of the Human Microbiome in Forensic Sciences: a Systematic Review.

Authors:  Manuel G García; María D Pérez-Cárceles; Eduardo Osuna; Isabel Legaz
Journal:  Appl Environ Microbiol       Date:  2020-10-28       Impact factor: 4.792

Review 2.  Interpol review of fingermarks and other body impressions 2016-2019.

Authors:  Andy Bécue; Heidi Eldridge; Christophe Champod
Journal:  Forensic Sci Int       Date:  2020-03-17       Impact factor: 2.395

Review 3.  Forensic Analysis of Human Microbiome in Skin and Body Fluids Based on Geographic Location.

Authors:  Hye-Won Cho; Yong-Bin Eom
Journal:  Front Cell Infect Microbiol       Date:  2021-08-12       Impact factor: 5.293

Review 4.  Forensic Applications of Microbiomics: A Review.

Authors:  Jake M Robinson; Zohar Pasternak; Christopher E Mason; Eran Elhaik
Journal:  Front Microbiol       Date:  2021-01-13       Impact factor: 5.640

Review 5.  DNA Transfer in Forensic Science: Recent Progress towards Meeting Challenges.

Authors:  Roland A H van Oorschot; Georgina E Meakin; Bas Kokshoorn; Mariya Goray; Bianca Szkuta
Journal:  Genes (Basel)       Date:  2021-11-07       Impact factor: 4.096

6.  [Simultaneous determination of 36 hypotensive drugs in fingerprints by ultra performance liquid chromatography-triple quadrupole composite linear ion trap mass spectrometry].

Authors:  Qiuyao DU; Yunfeng Zhang; Jifen Wang; Peng Zhao; Xiaojun Wu; Linpei Dong; Jiayi Li; Bingjie Liu
Journal:  Se Pu       Date:  2022-02-08
  6 in total

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