Literature DB >> 31026340

Translational Control under Stress: Reshaping the Translatome.

Vivek M Advani1,2, Pavel Ivanov1,2,3.   

Abstract

Adequate reprogramming of cellular metabolism in response to stresses or suboptimal growth conditions involves a myriad of coordinated changes that serve to promote cell survival. As protein synthesis is an energetically expensive process, its regulation under stress is of critical importance. Reprogramming of messenger RNA (mRNA) translation involves well-understood stress-activated kinases that target components of translation initiation machinery, resulting in the robust inhibition of general translation and promotion of the translation of stress-responsive proteins. Translational arrest of mRNAs also results in the accumulation of transcripts in cytoplasmic foci called stress granules. Recent studies focus on the key roles of transfer RNA (tRNA) in stress-induced translational reprogramming. These include stress-specific regulation of tRNA pools, codon-biased translation influenced by tRNA modifications, tRNA miscoding, and tRNA cleavage. In combination, signal transduction pathways and tRNA metabolism changes regulate translation during stress, resulting in adaptation and cell survival. This review examines molecular mechanisms that regulate protein synthesis in response to stress.
© 2019 WILEY Periodicals, Inc.

Entities:  

Keywords:  stress; tRNA; translation; translation initiation; translational reprogramming

Mesh:

Substances:

Year:  2019        PMID: 31026340      PMCID: PMC6541386          DOI: 10.1002/bies.201900009

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  119 in total

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Authors:  Matthew J Greenway; Peter M Andersen; Carsten Russ; Sean Ennis; Susan Cashman; Colette Donaghy; Victor Patterson; Robert Swingler; Dairin Kieran; Jochen Prehn; Karen E Morrison; Andrew Green; K Ravi Acharya; Robert H Brown; Orla Hardiman
Journal:  Nat Genet       Date:  2006-02-26       Impact factor: 38.330

Review 2.  Transfer RNA methytransferases and their corresponding modifications in budding yeast and humans: activities, predications, and potential roles in human health.

Authors:  William L Towns; Thomas J Begley
Journal:  DNA Cell Biol       Date:  2011-12-22       Impact factor: 3.311

3.  Perk is essential for translational regulation and cell survival during the unfolded protein response.

Authors:  H P Harding; Y Zhang; A Bertolotti; H Zeng; D Ron
Journal:  Mol Cell       Date:  2000-05       Impact factor: 17.970

4.  Protein degradation and dynamic tRNA thiolation fine-tune translation at elevated temperatures.

Authors:  Kshitiz Tyagi; Patrick G A Pedrioli
Journal:  Nucleic Acids Res       Date:  2015-04-13       Impact factor: 16.971

Review 5.  Determinants of translation efficiency and accuracy.

Authors:  Hila Gingold; Yitzhak Pilpel
Journal:  Mol Syst Biol       Date:  2011-04-12       Impact factor: 11.429

6.  A unifying model for mTORC1-mediated regulation of mRNA translation.

Authors:  Carson C Thoreen; Lynne Chantranupong; Heather R Keys; Tim Wang; Nathanael S Gray; David M Sabatini
Journal:  Nature       Date:  2012-05-02       Impact factor: 49.962

7.  RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules.

Authors:  N L Kedersha; M Gupta; W Li; I Miller; P Anderson
Journal:  J Cell Biol       Date:  1999-12-27       Impact factor: 10.539

8.  nanoCAGE reveals 5' UTR features that define specific modes of translation of functionally related MTOR-sensitive mRNAs.

Authors:  Valentina Gandin; Laia Masvidal; Laura Hulea; Simon-Pierre Gravel; Marie Cargnello; Shannon McLaughlan; Yutian Cai; Preetika Balanathan; Masahiro Morita; Arjuna Rajakumar; Luc Furic; Michael Pollak; John A Porco; Julie St-Pierre; Jerry Pelletier; Ola Larsson; Ivan Topisirovic
Journal:  Genome Res       Date:  2016-03-16       Impact factor: 9.043

9.  G3BP-Caprin1-USP10 complexes mediate stress granule condensation and associate with 40S subunits.

Authors:  Nancy Kedersha; Marc D Panas; Christopher A Achorn; Shawn Lyons; Sarah Tisdale; Tyler Hickman; Marshall Thomas; Judy Lieberman; Gerald M McInerney; Pavel Ivanov; Paul Anderson
Journal:  J Cell Biol       Date:  2016-03-28       Impact factor: 10.539

Review 10.  Modifications and functional genomics of human transfer RNA.

Authors:  Tao Pan
Journal:  Cell Res       Date:  2018-02-20       Impact factor: 25.617

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  23 in total

Review 1.  The Complex Interaction between P53 and miRNAs Joins New Awareness in Physiological Stress Responses.

Authors:  Camilla Capaccia; Silvana Diverio; Danilo Zampini; Gabriella Guelfi
Journal:  Cells       Date:  2022-05-13       Impact factor: 7.666

2.  AS-tDR-007872: A Novel tRNA-Derived Small RNA Acts an Important Role in Non-Small-Cell Lung Cancer.

Authors:  Hang Fan; Hongbing Liu; Yanling Lv; Yong Song
Journal:  Comput Math Methods Med       Date:  2022-06-16       Impact factor: 2.809

3.  RGG-motif containing mRNA export factor Gbp2 acts as a translation repressor.

Authors:  Gopalakrishna Poornima; Gaurav Srivastava; Brinta Roy; Ishwarya Achappa Kuttanda; Iladeiti Kurbah; Purusharth I Rajyaguru
Journal:  RNA Biol       Date:  2021-04-29       Impact factor: 4.652

Review 4.  Molecular mechanisms of stress granule assembly and disassembly.

Authors:  Sarah Hofmann; Nancy Kedersha; Paul Anderson; Pavel Ivanov
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2020-09-29       Impact factor: 4.739

5.  Opportunities and Challenges in Global Quantification of RNA-Protein Interaction via UV Cross-Linking.

Authors:  Carlos H Vieira-Vieira; Matthias Selbach
Journal:  Front Mol Biosci       Date:  2021-05-13

6.  The role of stress-activated RNA-protein granules in surviving adversity.

Authors:  Leah E Escalante; Audrey P Gasch
Journal:  RNA       Date:  2021-04-30       Impact factor: 4.942

Review 7.  Repeat-associated non-AUG (RAN) translation mechanisms are running into focus for GGGGCC-repeat associated ALS/FTD.

Authors:  Lindsey D Goodman; Nancy M Bonini
Journal:  Prog Neurobiol       Date:  2019-09-21       Impact factor: 10.885

8.  The RNA Helicase Ded1 Regulates Translation and Granule Formation during Multiple Phases of Cellular Stress Responses.

Authors:  Peyman P Aryanpur; Telsa M Mittelmeier; Timothy A Bolger
Journal:  Mol Cell Biol       Date:  2021-11-01       Impact factor: 5.069

Review 9.  Control of translation by eukaryotic mRNA transcript leaders-Insights from high-throughput assays and computational modeling.

Authors:  Christina Akirtava; Charles Joel McManus
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-08-31       Impact factor: 9.957

Review 10.  Functions of Bacterial tRNA Modifications: From Ubiquity to Diversity.

Authors:  Valérie de Crécy-Lagard; Marshall Jaroch
Journal:  Trends Microbiol       Date:  2020-07-25       Impact factor: 17.079

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