Literature DB >> 31026161

Fixing the Unfixable: The Art of Optimizing Natural Products for Human Medicine.

Audrey E Yñigez-Gutierrez1, Brian O Bachmann1.   

Abstract

Molecules isolated from natural sources including bacteria, fungi, and plants are a long-standing source of therapeutics that continue to add to our medicinal arsenal today. Despite their potency and prominence in the clinic, complex natural products often exhibit a number of liabilities that hinder their development as therapeutics, which may be partially responsible for the current trend away from natural product discovery, research, and development. However, advances in synthetic biology and organic synthesis have inspired a new generation of natural product chemists to tackle powerful undeveloped scaffolds. In this Perspective, we will present case studies demonstrating the historical and current focus on making targeted, but significant, changes to natural product scaffolds via biosynthetic gene cluster manipulation, total synthesis, semisynthesis, or a combination of these methods, with a focus on increasing activity, decreasing toxicity, or improving chemical and pharmacological properties.

Entities:  

Year:  2019        PMID: 31026161      PMCID: PMC7259720          DOI: 10.1021/acs.jmedchem.9b00246

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  159 in total

1.  Thirteen posttranslational modifications convert a 14-residue peptide into the antibiotic thiocillin.

Authors:  Laura C Wieland Brown; Michael G Acker; Jon Clardy; Christopher T Walsh; Michael A Fischbach
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-05       Impact factor: 11.205

2.  Geldanamycin, a new antibiotic.

Authors:  C DeBoer; P A Meulman; R J Wnuk; D H Peterson
Journal:  J Antibiot (Tokyo)       Date:  1970-09       Impact factor: 2.649

3.  Directed biosynthesis of 5"-fluoropactamycin in Streptomyces pactum.

Authors:  E S Adams; K L Rinehart
Journal:  J Antibiot (Tokyo)       Date:  1994-12       Impact factor: 2.649

Review 4.  Applications of Nonenzymatic Catalysts to the Alteration of Natural Products.

Authors:  Christopher R Shugrue; Scott J Miller
Journal:  Chem Rev       Date:  2017-06-05       Impact factor: 60.622

5.  Antibacterial optimization of 4-aminothiazolyl analogues of the natural product GE2270 A: identification of the cycloalkylcarboxylic acids.

Authors:  Matthew J LaMarche; Jennifer A Leeds; Kerri Amaral; Jason T Brewer; Simon M Bushell; Janetta M Dewhurst; JoAnne Dzink-Fox; Eric Gangl; Julie Goldovitz; Akash Jain; Steve Mullin; Georg Neckermann; Colin Osborne; Deborah Palestrant; Michael A Patane; Elin M Rann; Meena Sachdeva; Jian Shao; Stacey Tiamfook; Lewis Whitehead; Donghui Yu
Journal:  J Med Chem       Date:  2011-11-01       Impact factor: 7.446

6.  Nocathiacin I analogues: synthesis, in vitro and in vivo biological activity of novel semi-synthetic thiazolyl peptide antibiotics.

Authors:  B Narasimhulu Naidu; Margaret E Sorenson; Yunhui Zhang; Oak K Kim; John D Matiskella; John A Wichtowski; Timothy P Connolly; Wenying Li; Kin S Lam; Joanne J Bronson; Michael J Pucci; Junius M Clark; Yasutsugu Ueda
Journal:  Bioorg Med Chem Lett       Date:  2004-11-15       Impact factor: 2.823

Review 7.  Opportunities for merging chemical and biological synthesis.

Authors:  Stephen Wallace; Emily P Balskus
Journal:  Curr Opin Biotechnol       Date:  2014-04-18       Impact factor: 9.740

8.  Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.

Authors:  Joerg M Harms; Daniel N Wilson; Frank Schluenzen; Sean R Connell; Torsten Stachelhaus; Zaneta Zaborowska; Christian M T Spahn; Paola Fucini
Journal:  Mol Cell       Date:  2008-04-11       Impact factor: 17.970

9.  An analysis of FDA-approved drugs: natural products and their derivatives.

Authors:  Eric Patridge; Peter Gareiss; Michael S Kinch; Denton Hoyer
Journal:  Drug Discov Today       Date:  2015-01-21       Impact factor: 8.369

10.  Structure-activity relationship of the aminomethylcyclines and the discovery of omadacycline.

Authors:  Laura Honeyman; Mohamed Ismail; Mark L Nelson; Beena Bhatia; Todd E Bowser; Jackson Chen; Rachid Mechiche; Kwasi Ohemeng; Atul K Verma; E Pat Cannon; Ann Macone; S Ken Tanaka; Stuart Levy
Journal:  Antimicrob Agents Chemother       Date:  2015-09-08       Impact factor: 5.191

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  8 in total

1.  The quest for supernatural products: the impact of total synthesis in complex natural products medicinal chemistry.

Authors:  Zhi-Chen Wu; Dale L Boger
Journal:  Nat Prod Rep       Date:  2020-11-10       Impact factor: 13.423

2.  Identification of a 3-β-homoalanine conjugate of brusatol with reduced toxicity in mice.

Authors:  Nicky Hwang; Yonggang Pei; Jason Clement; Erle S Robertson; Yanming Du
Journal:  Bioorg Med Chem Lett       Date:  2020-09-21       Impact factor: 2.823

Review 3.  Unraveling Plant Natural Chemical Diversity for Drug Discovery Purposes.

Authors:  Emmanuelle Lautié; Olivier Russo; Pierre Ducrot; Jean A Boutin
Journal:  Front Pharmacol       Date:  2020-04-07       Impact factor: 5.810

Review 4.  Natural products in drug discovery: advances and opportunities.

Authors:  Atanas G Atanasov; Sergey B Zotchev; Verena M Dirsch; Claudiu T Supuran
Journal:  Nat Rev Drug Discov       Date:  2021-01-28       Impact factor: 112.288

5.  Chemical Composition and Biological Activities of the Essential Oils of Chrysophyllum albidum G. Don (African Star Apple).

Authors:  Daniel Nartey; Joseph Nana Gyesi; Lawrence Sheringham Borquaye
Journal:  Biochem Res Int       Date:  2021-06-11

6.  Catalysis-Enabled Access to Cryptic Geldanamycin Oxides.

Authors:  Margaret J Hilton; Christopher M Brackett; Brandon Q Mercado; Brian S J Blagg; Scott J Miller
Journal:  ACS Cent Sci       Date:  2020-02-24       Impact factor: 14.553

Review 7.  Amino acid-derived defense metabolites from plants: A potential source to facilitate novel antimicrobial development.

Authors:  Anutthaman Parthasarathy; Eli J Borrego; Michael A Savka; Renwick C J Dobson; André O Hudson
Journal:  J Biol Chem       Date:  2021-02-18       Impact factor: 5.157

8.  Media and strain studies for the scaled production of cis-enone resorcylic acid lactones as feedstocks for semisynthesis.

Authors:  Zeinab Y Al Subeh; Huzefa A Raja; Jennifer C Obike; Cedric J Pearce; Mitchell P Croatt; Nicholas H Oberlies
Journal:  J Antibiot (Tokyo)       Date:  2021-06-21       Impact factor: 3.424

  8 in total

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